LOCUS BC035353 2540 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ankyrin repeat and MYND domain containing 2, mRNA
(cDNA clone MGC:35388 IMAGE:5185501), complete cds.
ACCESSION BC035353
VERSION BC035353.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2540)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2540)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: f Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28461128.
FEATURES Location/Qualifiers
source 1..2540
/db_xref="H-InvDB:HIT000051378"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35388 IMAGE:5185501"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2540
/gene="ANKMY2"
/gene_synonym="DKFZP564O043"
/gene_synonym="ZMYND20"
/db_xref="GeneID:57037"
/db_xref="HGNC:HGNC:25370"
CDS 201..1526
/gene="ANKMY2"
/gene_synonym="DKFZP564O043"
/gene_synonym="ZMYND20"
/codon_start=1
/product="ankyrin repeat and MYND domain containing 2"
/protein_id="AAH35353.1"
/db_xref="GeneID:57037"
/db_xref="HGNC:HGNC:25370"
/translation="MVHIKKGELTQEEKELLEVIGKGTVQEAGTLLSSKNVRVNCLDE
NGMTPLMHAAYKGKLDMCKLLLRHGADVNCHQHEHGYTALMFAALSGNKDITWVMLEA
GAETDVVNSVGRTAAQMAAFVGQHDCVTIINNFFPRERLDYYTKPQGLDKEPKLPPKL
AGPLHKIITTTNLHPVKIVMLVNENPLLTEEAALNKCYRVMDLICEKCMKQRDMNEVL
AMKMHYISCIFQKCINFLKDGENKLDTLIKSLLKGRASDGFPVYQEKIIRESIRKFPY
CEATLLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTCGEKGASKRCSV
CKMVIYCDQTCQKTHWFTHKKICKNLKDIYEKQQLEAAKEKRQEENHGKLDVNSNCVN
EEQPEAEVGISQKDSNPEDSGEGKKESLESEAELEGLQDAPAGPQVSEE"
BASE COUNT 816 a 489 c 569 g 666 t
ORIGIN
1 ccgtccgcct ggctcgcccg agctcgcccg ctgtccgcca gcccgcggga gggaggagag
61 aagcgaagcg tttccgcggt tggctactca gtgtcttggt ctcaagttgc ctcattgcgg
121 ctggcgttcc caatacagac gcatcgtttc ttttttaata ctccctaaga aagggaataa
181 ccttcaagct ggcgggagca atggttcaca taaagaaagg cgagctgacc caggaggaga
241 aggagctact ggaagtcatc gggaaaggta ctgtccaaga agctggaaca ttattatcca
301 gcaagaatgt tcgtgtcaac tgtttggacg agaatggaat gactcctcta atgcatgcag
361 catataaagg aaaactcgat atgtgcaaat tactactgcg acatggagcc gatgtaaatt
421 gtcatcagca tgaacatgga tacacagccc tcatgtttgc tgcactttct ggtaataaag
481 acatcacatg ggtaatgtta gaagctggtg ctgagacaga tgttgtcaac tctgtgggaa
541 gaacagcagc tcagatggca gcctttgtgg gtcaacatga ttgtgtgacc ataatcaaca
601 atttctttcc tcgagagaga ctggattatt acactaagcc ccagggactg gataaagagc
661 caaaactgcc cccaaagttg gcaggcccgc tgcacaaaat tatcaccaca acgaatcttc
721 atcctgtcaa gatcgtgatg cttgtaaatg agaatcctct gctgacagaa gaagcagccc
781 tgaataaatg ctacagagtg atggatttga tttgtgagaa atgtatgaag caaagagaca
841 tgaatgaagt attggctatg aagatgcatt acataagctg tatctttcag aaatgcatta
901 acttcttaaa agatggagag aataaactgg acaccttgat caaaagcttg ttaaaaggcc
961 gagcttctga tggctttcca gtgtatcaag aaaagatcat tagagaaagt atcagaaaat
1021 ttccttactg tgaagctaca ctcctccagc agctggttcg aagcattgct cctgttgaaa
1081 ttggttctga tcccactgca ttctccgtcc ttacccaagc catcactggc caggtgggtt
1141 ttgtggatgt ggaattttgc actacctgtg gagaaaaggg agcaagtaaa agatgttcag
1201 tttgcaaaat ggtaatatat tgtgatcaaa cctgccagaa aacacactgg tttactcata
1261 agaaaatctg taagaatctg aaggacattt acgaaaagca acagttggag gctgccaaag
1321 aaaagagaca agaggaaaac cacggcaaac ttgatgtcaa ttctaactgt gttaatgaag
1381 agcaaccaga ggctgaagta ggtatctctc aaaaggattc taatcctgaa gattccgggg
1441 aaggaaagaa agaatctctt gaaagcgaag ctgagttgga aggcttacag gatgctcctg
1501 cagggccaca ggtgtctgag gagtaaaagc cagagcaagt gccagtgtgg atggtcctca
1561 ccctgcaaga agctggaaaa ctcctaggaa tgcattgtcc tcaccttgtt atacctgcgt
1621 ggcaccatgg caggattcca catttcatag aatacaggtt ttcaagcaaa cccctgttga
1681 ccatgcccta atttcctatt gatttctgtt ctataattga atggatattc ctatggaaaa
1741 ttttttgttt caaaatacag gaaaaacatt cctattacct ttctgaggct ggctttccag
1801 caattgtttc aaaggaaaat agatcccctt aaagaaaaaa tacaggcttt agggaacaaa
1861 gggacaagca gaacaggtgt ggaagagaga ttttcaggaa gggaaaaatt tatagctaca
1921 gagggtagtt agaaaaatca taacttatat gtgaataaaa tacatataag cagcatttac
1981 ggtagtggca ttctacttat taagatgcaa tgaaatgaag aaaggcttta tgttcaagga
2041 cctttgccat agttcagcta attgtagttt tatatagaaa tgatcctgaa cactctgaac
2101 ttgacgtagt cctgcggtga tattctatct gcagtatttg tacctccaga atggcagatc
2161 cctcagcagg aacaaaggca tattgacggt tctctcagcg tatgcattaa aaaaggtact
2221 tcctgaaact tttgattcaa taatgactaa acatactatg tacacaatta ctgtaaggct
2281 aattcacgtg ccatactcca cctgaaagcc tgagttatct tgctataagc ttttcatgga
2341 gcacttcctt tccagaaact gatttgtaac tcatttagag aatgtcctgg cgtcggtttt
2401 tagcatatgt ggtatttaaa cagagctaga atgtgatgtc tgaagataat gctgcatttc
2461 tgggtttctt gtgtggattt taaaataaat tgtgcctaca aatataaaca aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaaaaa
//