LOCUS BC035343 2173 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-C motif) receptor 7, mRNA (cDNA clone
MGC:34623 IMAGE:5180758), complete cds.
ACCESSION BC035343
VERSION BC035343.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2173)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2173)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: b Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30795213.
FEATURES Location/Qualifiers
source 1..2173
/db_xref="H-InvDB:HIT000051374"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34623 IMAGE:5180758"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2173
/gene="CCR7"
/gene_synonym="BLR2"
/gene_synonym="CD197"
/gene_synonym="CDw197"
/db_xref="GeneID:1236"
/db_xref="HGNC:HGNC:1608"
/db_xref="MIM:600242"
CDS 42..1178
/gene="CCR7"
/gene_synonym="BLR2"
/gene_synonym="CD197"
/gene_synonym="CDw197"
/codon_start=1
/product="chemokine (C-C motif) receptor 7"
/protein_id="AAH35343.1"
/db_xref="GeneID:1236"
/db_xref="HGNC:HGNC:1608"
/db_xref="MIM:600242"
/translation="MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLF
ESLCSKKDVRNFKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAV
ADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQ
AVSAHRHRARVLLISKLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVE
AFITIQVAQMVIGFLVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQ
LPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFR
NDLFKLFKDLGCLSQEQLRQWSSCRHIRRSSMSVEAETTTTFSP"
BASE COUNT 512 a 643 c 538 g 480 t
ORIGIN
1 ggcacagcct tcctgtgtgg ttttaccgcc cagagagcgt catggacctg gggaaaccaa
61 tgaaaagcgt gctggtggtg gctctccttg tcattttcca ggtatgcctg tgtcaagatg
121 aggtcacgga cgattacatc ggagacaaca ccacagtgga ctacactttg ttcgagtctt
181 tgtgctccaa gaaggacgtg cggaacttta aagcctggtt cctccctatc atgtactcca
241 tcatttgttt cgtgggccta ctgggcaatg ggctggtcgt gttgacctat atctatttca
301 agaggctcaa gaccatgacc gatacctacc tgctcaacct ggcggtggca gacatcctct
361 tcctcctgac ccttcccttc tgggcctaca gcgcggccaa gtcctgggtc ttcggtgtcc
421 acttttgcaa gctcatcttt gccatctaca agatgagctt cttcagtggc atgctcctac
481 ttctttgcat cagcattgac cgctacgtgg ccatcgtcca ggctgtctca gctcaccgcc
541 accgtgcccg cgtccttctc atcagcaagc tgtcctgtgt gggcatctgg atactagcca
601 cagtgctctc catcccagag ctcctgtaca gtgacctcca gaggagcagc agtgagcaag
661 cgatgcgatg ctctctcatc acagagcatg tggaggcctt tatcaccatc caggtggccc
721 agatggtgat cggctttctg gtccccctgc tggccatgag cttctgttac cttgtcatca
781 tccgcaccct gctccaggca cgcaactttg agcgcaacaa ggccatcaag gtgatcatcg
841 ctgtggtcgt ggtcttcata gtcttccagc tgccctacaa tggggtggtc ctggcccaga
901 cggtggccaa cttcaacatc accagtagca cctgtgagct cagtaagcaa ctcaacatcg
961 cctacgacgt cacctacagc ctggcctgcg tccgctgctg cgtcaaccct ttcttgtacg
1021 ccttcatcgg cgtcaagttc cgcaacgatc tcttcaagct cttcaaggac ctgggctgcc
1081 tcagccagga gcagctccgg cagtggtctt cctgtcggca catccggcgc tcctccatga
1141 gtgtggaggc cgagaccacc accaccttct ccccataggc gactcttctg cctggactag
1201 agggacctct cccagggtcc ctggggtggg gatagggagc agatgcaatg actcaggaca
1261 tccccccgcc aaaagctgct cagggaaaag cagctctccc ctcagagtgc aagcccctgc
1321 tccagaagat agcttcaccc caatcccagc tacctcaacc aatgccaaaa aaagacaggg
1381 ctgataagct aacaccagac agacaacact gggaaacaga ggctattgtc ccctaaacca
1441 aaaactgaaa gtgaaagtcc agaaactgtt cccacctgct ggagtgaagg ggccaaggag
1501 ggtgagtgca aggggcgtgg gagtggcctg aagagtcctc tgaatgaacc ttctggcctc
1561 ccacagactc aaatgctcag accagctctt ccgaaaacca ggccttatct ccaagaccag
1621 agatagtggg gagacttctt ggcttggtga ggaaaagcgg acatcagctg gtcaaacaaa
1681 ctctctgaac ccctccctcc atcgttttct tcactgtcct ccaagccagc gggaatggca
1741 gctgccacgc cgccctaaaa gcacactcat cccctcactt gccgcgtcgc cctcccaggc
1801 tctcaacagg ggagagtgtg gtgtttcctg caggccaggc cagctgcctc cgcgtgatca
1861 aagccacact ctgggctcca gagtggggat gacatgcact cagctcttgg ctccactggg
1921 atgggaggag aggacaaggg aaatgtcagg ggcggggagg gtgacagtgg ccgcccaagg
1981 cccacgagct tgttctttgt tctttgtcac agggactgaa aacctctcct catgttctgc
2041 tttcgattcg ttaagagagc aacattttac ccacacacag ataaagtttt cccttgagga
2101 aacaacagct ttaaaagaaa aagaaaaaaa aagtctttgg taaatggcaa aaaaaaaaaa
2161 aaaaaaaaaa aaa
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