LOCUS BC035335 3370 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens phospholipase A2, group IVF, mRNA (cDNA clone
IMAGE:5182144), partial cds.
ACCESSION BC035335
VERSION BC035335.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3370)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3370)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: c Column: 20.
FEATURES Location/Qualifiers
source 1..3370
/db_xref="H-InvDB:HIT000093831"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5182144"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3370
/gene="PLA2G4F"
/gene_synonym="PLA2G4F/Z"
/db_xref="GeneID:255189"
/db_xref="HGNC:HGNC:27396"
/db_xref="IMGT/GENE-DB:27396"
/db_xref="MIM:27396"
CDS <1..2539
/gene="PLA2G4F"
/gene_synonym="PLA2G4F/Z"
/codon_start=2
/product="PLA2G4F protein"
/protein_id="AAH35335.1"
/db_xref="GeneID:255189"
/db_xref="HGNC:HGNC:27396"
/db_xref="IMGT/GENE-DB:27396"
/db_xref="MIM:27396"
/translation="QFVQPEERRQGSLLGPGLPSHALGTLAKVAGRQDAAPPGGSAAS
EEREEGPSVEALAVSKADCYVQLWLPTASPSPAQTRIVANCSDPEWNETFHYQIHGAV
KNVLELTLYDKDILGSDQLSLLLFDLRSLKCGQPHKHTFPLNHQDSQELQVEFVLEKS
QVPASEVITNGVLVAHPCLRIQGTLRGDGTAPREEYGSRQLQLAVPGAYEKPQLLPLQ
PPTEPGLPPTFTFHVNPVLSSRLHVELMEVLAAVQSGPSAELEAQTSKLGEGGILLSS
LPLGQEEQCSVALGEGQEVALSMKVEMSSGDLDLRLGFDLSDGEQEFLDRRKQVVSKA
LQQVLGLSEALDSGQVPVVAVLGSGGGTRAMSSLYGSLAGLQELGLLDAVTYLSGVSG
STWCISTLYRDPAWSQVALQGPIERAQVHVCSSKMGALSTERLQYYTQELGVRERSGH
SVSLIDLWGLLVEYLLYQEENPAKLSDQQEAVRQGQNPYPIYTSVNVRTNLSGEDFAE
WCEFTPYEVGFPKYGAYVPTELFGSELFMGRLLQLQPEPRICYLQGMWGSAFATSLDE
IFLKTAGSGLSFLEWYRGSVNITDDCQKPQLHNPSRLRTRLLTPQGPFSQAVLDIFTS
RFTSAQSFNFTRGLCLHKDYVAGREFVAWKDTHPDAFPNQLTPMRDCLYLVDGGFAIN
SPFPLALLPQRAVDLILSFDYSLEAPFEVLKMTEKYCLDRGIPFPSIEVGPEDVEEAR
ECYLFAKAEDPRSPIVLHFPLVNRTFRTHLAPGVERQTAEEKAFGDFVINRPDTPYGM
MNFTYEPQDFYRLVALSRYNVLNNVETLKCALQLALDRHQARERAGA"
BASE COUNT 720 a 1000 c 982 g 668 t
ORIGIN
1 gcagtttgtg caaccagagg agcgcaggca gggttccctg ctggggcccg ggctgcccag
61 ccatgctttg ggcactctgg ccaaggtggc tggcagacaa gatgctgccc ctcctggggg
121 cagtgctgct tcagaagaga gagaagaggg gccctctgtg gaggcactgg cggtgtccaa
181 agccgactgc tatgtgcaac tgtggctgcc cacggcgtcc ccaagccctg cccagactag
241 gatagtggcc aactgcagtg accccgagtg gaatgagacc ttccactacc agatccatgg
301 tgctgtgaag aacgtcctgg agctcaccct ctatgacaag gacatcctgg gcagcgacca
361 gctctctctg ctcctgtttg acctgagaag cctcaagtgt ggccaacctc acaaacacac
421 cttcccactc aaccaccagg attcacaaga gctgcaggtg gaatttgttc tggagaagag
481 ccaggtgcct gcatctgaag tcatcaccaa cggggttctg gtggctcacc cctgtctgag
541 aatccagggc acgctccggg gagatgggac agccccacgg gaagagtacg gctctaggca
601 gctccagctg gcagtgcctg gagcctacga gaagccacag ctcttgcccc tgcagcctcc
661 cacagagcca ggcctcccac ccacctttac cttccacgtg aacccagtgc tgagctccag
721 gctacacgtg gagctgatgg aggtgctggc agctgtgcag agtggcccca gcgcagagtt
781 ggaggctcag accagcaagc tgggcgaggg gggcatcctg ctctcctctc tgcccctagg
841 ccaggaggaa cagtgttctg tggccctggg ggagggccag gaggtggctc tgagcatgaa
901 ggtggaaatg agctccgggg acctagacct acgccttggc tttgacctct ctgacgggga
961 gcaggagttt ctggacagga ggaagcaggt cgtgtccaag gccctgcagc aagtgctggg
1021 attgagtgag gctctggaca gtggccaggt gcctgtagtg gctgtgttgg gttccggggg
1081 tggaacccga gccatgtctt ctctgtacgg cagcctggca gggttgcagg agctcggcct
1141 tctagacgct gtgacctacc tgagtggggt ctctgggtct acctggtgca tctccacact
1201 ctacagggac ccagcctggt cccaggtggc cttgcagggc cccattgagc gtgcccaggt
1261 tcacgtctgc agcagtaaga tgggagcttt gtccacggag cggctacagt actacactca
1321 ggaactgggg gtccgggagc gcagtggcca cagtgtgtcc ctcatcgacc tctggggcct
1381 ccttgttgag tatctcctgt accaggagga gaaccctgcc aagctgtctg accaacagga
1441 ggcggtccgc cagggtcaga acccttaccc catttacacc agtgtcaacg tccgcaccaa
1501 cttgagtggg gaagattttg cagagtggtg cgagttcacg ccctatgagg ttggcttccc
1561 caagtacggg gcttatgttc ccaccgagct cttcggctca gaactcttca tgggacgatt
1621 gctgcagctc cagcctgaac cccggatctg ttacctgcaa ggtatgtggg gcagcgcctt
1681 tgccaccagc ctggatgaga tcttcctaaa gaccgccggc tcgggcctca gcttcctgga
1741 gtggtacaga ggcagtgtga atatcacaga cgactgccag aagcctcagc tgcacaaccc
1801 ctcgaggctg cgaacgaggc tcctcacccc acaggggccc ttctcccagg ctgtgctgga
1861 catattcacc tcccgcttca cttccgccca gagctttaac ttcacccggg gtctctgctt
1921 gcacaaggac tatgtggctg gcagggagtt cgtggcctgg aaagacacac acccggacgc
1981 cttccccaac cagctcaccc ccatgcggga ctgcctgtac ctggtggacg gaggctttgc
2041 catcaactct ccgttcccac tggctctgct gcctcagaga gcagtggacc tcattctgtc
2101 ctttgactat tccttggaag ccccttttga ggtcttgaag atgacagaga agtactgcct
2161 ggaccgagga atccccttcc ctagcatcga ggtgggccct gaggacgtgg aggaggcccg
2221 tgagtgctat ctgtttgcca aggctgagga cccccgctcc cccattgtgc tgcacttccc
2281 cctggttaac cgtaccttcc gcacacacct ggccccaggt gtggagcgac aaacagctga
2341 ggagaaggcc tttggggact ttgtcatcaa caggccagac accccctatg gcatgatgaa
2401 cttcacctat gagccccagg acttttatcg gctggtggcc ctcagtcgat acaacgtcct
2461 gaacaacgtg gagaccttga agtgcgccct ccagctggct ctggaccggc accaggctcg
2521 ggagagggca ggggcctgac caaggcagga agcggaggac tgtgacagag aggagacaca
2581 ctgctcatgg tcagggcttg tagagggagg agcgatgggg actctgtgca ggatctgctt
2641 cccttctctc caggacctgc ctcgaggtgc cccaggcccc ggaaagctct tgcagaattg
2701 cagcttggac tggggcaggg ctctccttgt gtgtttttgg agaagatggg cagtagatcg
2761 ctccagggac tcttggggat gtagggcaga agagaacagc actcatttca cagcggggtg
2821 tggagagaat caggtgagcc acagagccca ccccagacac agaaggacct cagagggccc
2881 aagtcctcag acccacacag aacaggggct gagggcaccg agaagccagc tgtcctcctt
2941 acactgagat ggaaagcaga gatgcatcca tccacacttc ctgcagagcg gcccaagccc
3001 caaccccacc tcgagctcct ggatgcactg ctatcaagaa caatgagggg ctgaggggat
3061 ggccagccta tgttgctgac tccatcatcc taaccctcct tctgccttct ggtctcctcg
3121 tgcctcctcc cagatcaccc ttctcttccc agcgccctaa agcctgtggg gtgatgtccc
3181 attctggctg ctccaggtgg gagatgtgcg cgtgtctccc tgccagttac ccaggcttca
3241 ctcttcgaac ctggaccaca gtctctggtg atgtgtgtag tggccacatc atgcaaatat
3301 agtctcacca ttcctaggaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3361 aaaaaaaaaa
//