LOCUS BC035133 3389 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens leucine rich repeat neuronal 3, mRNA (cDNA clone
MGC:43233 IMAGE:5263900), complete cds.
ACCESSION BC035133
VERSION BC035133.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3389)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3389)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC035133.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059785.
FEATURES Location/Qualifiers
source 1..3389
/db_xref="H-InvDB:HIT000051337"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43233 IMAGE:5263900"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3389
/gene="LRRN3"
/gene_synonym="FLJ11129"
/gene_synonym="NLRR-3"
/gene_synonym="NLRR3"
/db_xref="GeneID:54674"
/db_xref="HGNC:HGNC:17200"
CDS 737..2863
/gene="LRRN3"
/gene_synonym="FLJ11129"
/gene_synonym="NLRR-3"
/gene_synonym="NLRR3"
/codon_start=1
/product="leucine rich repeat neuronal 3"
/protein_id="AAH35133.1"
/db_xref="GeneID:54674"
/db_xref="HGNC:HGNC:17200"
/translation="MKDMPLRIHVLLGLAITTLVQAVDKKVDCPRLCTCEIRPWFTPR
SIYMEASTVDCNDLGLLTFPARLPANTQILLLQTNNIAKIEYSTDFPVNLTSLDLSQN
NLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAF
IGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLV
IAGINLTEIPDNALVGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKNPINRIR
RGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLP
KLESLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWMNMNKTNIRFMEPD
SLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSNLNVEAGSYVSFHCRATAEP
QPEIYWITPSGQKLLPNTLTDKFYVHSEGTLDINGVTPKEGGLYTCIATNLVGADLKS
VMIKVDGSFPQDNNGSLNIKIRDIHANSVLVSWKASSKILKSSVKWTAFVKTENSHAA
QSARIPSDVKVYNLTHLNPSTEYKICIDIPTIYQKNRKKCVNVTTKGLHPDQKEYEKN
NTTTLMACLGGLLGIIGVICLISCLSPEMNCDGGHSYVRNYLQKPTFALGELYPPLIN
LWEAGKEKSTSLKVKATVIGLPTNMS"
BASE COUNT 1149 a 692 c 598 g 950 t
ORIGIN
1 gtcggtgtga caactgatcg ggtgaacgat gcaccactaa ccaccatgga aacaaggaaa
61 aataaagcaa gctcacagga tctctcttca ctggattgag agcctcagcc tgccgactga
121 gaaaaagagt tccaggaaaa agaaggaatc ccggctgcag cctcctgcct tcctttatat
181 tttaaaatag agagataaga ttgcgtgcat gtgtgcatat ctatagtata tattttgtac
241 actttgttac acagacacac aaatgcacct atttataccg ggcaagaaca caaccatgtg
301 attatctcaa ccaaggaact gaggaatcca gcacgcaagg acatcggagg tgggctagca
361 ctgaaactgc ttttcaagca tcatgctgct attcctgcaa atactgaaga agcatgggat
421 ttaaatattt tacttctaaa taaatgaatt actcaatctc ctatgaccat ctatacatac
481 tccaccttca aaaagtacat caatattata tcattaagga aatagtaacc ttctcttctc
541 caatatgcat gacatttttg gacaatgcaa ttgtggcact ggcacttgtt tcagtgaaga
601 aaaactttgt ggttctatgg cattcatcat ttgacaaatg caagcatctt ccttatcaat
661 cagctcctat tgaacttact agcactgact gtggaatcct taagggccca ttacatttct
721 gaagaagaaa gctaagatga aggacatgcc actccgaatt catgtgctac ttggcctagc
781 tatcactaca ctagtacaag ctgtagataa aaaagtggat tgtccacggt tatgtacgtg
841 tgaaatcagg ccttggttta cacccagatc catttatatg gaagcatcta cagtggattg
901 taatgattta ggtcttttaa ctttcccagc cagattgcca gctaacacac agattcttct
961 cctacagact aacaatattg caaaaattga atactccaca gactttccag taaaccttac
1021 tagcctggat ttatctcaaa acaatttatc ttcagtcacc aatattaatg taaaaaagat
1081 gcctcagctc ctttctgtgt acctagagga aaacaaactt actgaactgc ctgaaaaatg
1141 tctgtccgaa ctgagcaact tacaagaact ctatattaat cacaacttgc tttctacaat
1201 ttcacctgga gcctttattg gcctacataa tcttcttcga cttcatctca attcaaatag
1261 attgcagatg atcaacagta agtggtttga tgctcttcca aatctagaga ttctgatgat
1321 tggggaaaat ccaattatca gaatcaaaga catgaacttt aagcctctta tcaatcttcg
1381 cagcctggtt atagctggta taaacctcac agaaatacca gataacgcct tggttggact
1441 ggaaaactta gaaagcatct ctttttacga taacaggctt attaaagtac cccatgttgc
1501 tcttcaaaaa gttgtaaatc tcaaattttt ggatctaaat aaaaatccta ttaatagaat
1561 acgaaggggt gattttagca atatgctaca cttaaaagag ttggggataa ataatatgcc
1621 tgagctgatt tccatcgata gtcttgctgt ggataacctg ccagatttaa gaaaaataga
1681 agctactaac aaccctagat tgtcttacat tcaccccaat gcatttttca gactccccaa
1741 gctggaatca ctcatgctga acagcaatgc tctcagtgcc ctgtaccatg gtaccattga
1801 gtctctgcca aacctcaagg aaatcagcat acacagtaac cccatcaggt gtgactgtgt
1861 catccgttgg atgaacatga acaaaaccaa cattcgattc atggagccag attcactgtt
1921 ttgcgtggac ccacctgaat tccaaggtca gaatgttcgg caagtgcatt tcagggacat
1981 gatggaaatt tgtctccctc ttatagctcc tgagagcttt ccttctaatc taaatgtaga
2041 agctgggagc tatgtttcct ttcactgtag agctactgca gaaccacagc ctgaaatcta
2101 ctggataaca ccttctggtc aaaaactctt gcctaatacc ctgacagaca agttctatgt
2161 ccattctgag ggaacactag atataaatgg cgtaactccc aaagaagggg gtttatatac
2221 ttgtatagca actaacctag ttggcgctga cttgaagtct gttatgatca aagtggatgg
2281 atcttttcca caagataaca atggctcttt gaatattaaa ataagagata ttcatgccaa
2341 ttcagttttg gtgtcctgga aagcaagttc taaaattctc aaatctagtg ttaaatggac
2401 agcctttgtc aagactgaaa attctcatgc tgcgcaaagt gctcgaatac catctgatgt
2461 caaggtatat aatcttactc atctgaatcc atcaactgag tataaaattt gtattgatat
2521 tcccaccatc tatcagaaaa acagaaaaaa atgtgtaaat gtcaccacca aaggtttgca
2581 ccctgatcaa aaagagtatg aaaagaataa taccacaaca cttatggcct gtcttggagg
2641 ccttctgggg attattggtg tgatatgtct tatcagctgc ctctctccag aaatgaactg
2701 tgatggtgga cacagctatg tgaggaatta cttacagaaa ccaacctttg cattaggtga
2761 gctttatcct cctctgataa atctctggga agcaggaaaa gaaaaaagta catcactgaa
2821 agtaaaagca actgttatag gtttaccaac aaatatgtcc taaaaaccac caaggaaacc
2881 tactccaaaa atgaacaaaa aaaaaaaaag cgaaagactg cagttgtgct aaaaacaaaa
2941 caaaacaaac aaacaaacaa aaaagtaaaa aaagattact ttcgagagag aagtttaagc
3001 ttcaccaatg ctgctcctga ccaatggaaa tatgtacaac ttcagcattt taagtaactg
3061 gcttcaaggg gtactgtggc aaccaaataa aataactcca ttttctaaaa ctttcatgta
3121 acttttatgt ctggactaca gttcaagtgg acaaaaacat ttctgtattt tttttaagta
3181 aataagagta gttgaactga gcaatacctc ctcctgtgtt gtattacaca tattagccac
3241 gagtttttgc agtgaccaga taaacttgaa ttgacacgtg gtgtaataaa atggacaaat
3301 tctgtagagt agacacagtg agtatgtgga cctcttttat aaggaaaaat acattttgga
3361 ttaaaatcaa aaaaaaaaaa aaaaaaaaa
//