LOCUS BC035059 2587 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens potassium voltage-gated channel, shaker-related
subfamily, member 3, mRNA (cDNA clone MGC:41884 IMAGE:5261639),
complete cds.
ACCESSION BC035059
VERSION BC035059.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2587)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2587)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: e Column: 12.
FEATURES Location/Qualifiers
source 1..2587
/db_xref="H-InvDB:HIT000051322"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41884 IMAGE:5261639"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2587
/gene="KCNA3"
/gene_synonym="HGK5"
/gene_synonym="HLK3"
/gene_synonym="HPCN3"
/gene_synonym="HUKIII"
/gene_synonym="KV1.3"
/gene_synonym="MK3"
/gene_synonym="PCN3"
/db_xref="GeneID:3738"
/db_xref="HGNC:HGNC:6221"
/db_xref="MIM:176263"
CDS 226..1953
/gene="KCNA3"
/gene_synonym="HGK5"
/gene_synonym="HLK3"
/gene_synonym="HPCN3"
/gene_synonym="HUKIII"
/gene_synonym="KV1.3"
/gene_synonym="MK3"
/gene_synonym="PCN3"
/codon_start=1
/product="potassium voltage-gated channel, shaker-related
subfamily, member 3"
/protein_id="AAH35059.2"
/db_xref="GeneID:3738"
/db_xref="HGNC:HGNC:6221"
/db_xref="MIM:176263"
/translation="MDERLSLLRSPPPPSARHRAHPPQRPASSGGAHTLVNHGYAEPA
AGRELPPDMTVVPGDHLLEPEVADGGGAPPQGGCGGGGCDRYEPLPPSLPAAGEQDCC
GERVVINISGLRFETQLKTLCQFPETLLGDPKRRMRYFDPLRNEYFFDRNRPSFDAIL
YYYQSGGRIRRPVNVPIDIFSEEIRFYQLGEEAMEKFREDEGFLREEERPLPRRDFQR
QVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPEFRDEKDYPASTSQDSFEA
AGNSTSGSRAGASSFSDPFFVVETLCIIWFSFELLVRFFACPSKATFSRNIMNLIDIV
AIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLK
ASMRELGLLIFFLFIGVILFSSAVYFAEADDPTSGFSSIPDAFWWAVVTMTTVGYGDM
HPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQSQYMHVGSCQHL
SSSAEELRKARSNSTLSKSEYMVIEEGGMNHSAFPQTPFKTGNSTATCTTNNNPNSCV
NIKKIFTDV"
BASE COUNT 540 a 775 c 711 g 561 t
ORIGIN
1 agcggagtcg ggcgcgcgcc ccgcagggga gggggcggag agcgcgagaa ggagggagga
61 ggcgtccccg tgcgggagcc cggctgaccg cgccagaccc agacagagca tcgcggcttt
121 ggctgcaaca ggcggtgggc tcggctcggg ggcggaggcg gcgaaagggc ggggagcgcg
181 aggaggagcg acctggcctc accgctgccg cctcttcccc gccgcatgga cgagcgcctc
241 agccttctgc gctcgccgcc gccgccctca gcccgccacc gcgcccaccc tcctcagcgc
301 ccagcgagca gcggcggtgc ccacacgctg gtgaaccacg gctacgcgga gcccgccgca
361 ggccgcgagc tgccgcccga catgaccgtg gtgcccgggg accacctgct ggagccggag
421 gtggccgatg gtggaggggc cccgcctcaa ggcggctgtg gcggcggcgg ctgcgaccgc
481 tacgagccgc tgccgccctc actgccggcc gcgggcgagc aggactgctg cggggagcgc
541 gtggtcatca acatctccgg gctgcgcttc gagacgcagc tgaagaccct ttgccagttc
601 cccgagacgc tgctgggcga ccccaagcgg cgcatgaggt acttcgaccc gctccgcaac
661 gagtacttct tcgaccgcaa ccggcccagc ttcgacgcca tcctctacta ctatcagtcc
721 gggggccgca tccgccggcc ggtcaacgtg cccatcgaca ttttctccga ggagatccgc
781 ttctaccagc tgggcgagga ggccatggag aagttccgcg aggacgaggg cttcctgcgg
841 gaggaggagc ggcccttgcc ccgccgcgac ttccagcgcc aggtgtggct gctcttcgag
901 taccccgaga gctccgggcc ggcccggggc atcgccatcg tgtccgtgct ggtcatcctc
961 atctccattg tcatcttctg cctggagacg ctgccggagt tccgcgacga gaaggactac
1021 cccgcctcga cgtcgcagga ctcattcgaa gcagccggca acagcacgtc ggggtcccgc
1081 gcaggagcct ccagcttctc cgatcccttc ttcgtggtgg agacgctgtg catcatctgg
1141 ttctccttcg aactgctggt gcggttcttc gcttgtccta gcaaagccac cttctcgcga
1201 aacatcatga acctgatcga cattgtggcc atcattcctt attttatcac tctgggtaca
1261 gagctggccg aacgacaggg caatggacag caggccatgt ctctggccat cctgagggtc
1321 atccgcctgg taagggtctt ccgcatcttc aagctgtcgc gccactccaa ggggctgcag
1381 atcctcgggc aaacgctgaa ggcgtccatg cgggagctgg gattgctcat cttcttcctc
1441 tttattgggg tcatcctttt ctccagcgcg gtctactttg ccgaggcaga cgaccccact
1501 tcaggtttca gcagcatccc ggatgccttc tggtgggcag tggtaaccat gacaacagtg
1561 ggttacggcg atatgcaccc agtgaccata gggggcaaga ttgtgggatc tctctgtgcc
1621 atcgccggtg tcttgaccat cgcattgcca gttcccgtga ttgtttccaa cttcaattac
1681 ttctaccacc gggagacaga aggggaagag caatcccagt acatgcacgt gggaagttgc
1741 cagcacctct cctcttcagc cgaggagctc cgaaaagcaa ggagtaactc gactctgagt
1801 aagtcggagt atatggtgat cgaagagggg ggtatgaacc atagcgcttt cccccagacc
1861 cctttcaaaa cgggcaattc cactgccacc tgcaccacga acaataatcc caactcttgt
1921 gtcaacatca aaaagatatt caccgatgtt taatatgtga tacaagtgac atgctgtgct
1981 cagtattgtg tggaacgtgc ccccttggtc tgcctatgcc cttgttttat acatttccag
2041 accattcatc aaggaaagga cctgaagaag tggaaagcac acttcattct ccctctccct
2101 gctgcttcat actgaaacag gtgcctgttt tgcaagtggg ctgcattctc tcagctctcc
2161 ttttccctct taccctctct ctcttaacat tgtaaacaac agacttacgt taaacttcat
2221 ttctagtaca cgccctattt aaaaaagagc agtacatcct gggaggaaat gaaactaaag
2281 aacagttaga gtaactgttt aacctcagaa ttttaaaggc agttgtttct ttcctaagca
2341 catcaattcg tagtaaatga tgcttcggtt tgatggacct ttcaacgtta tttattgaat
2401 atgtatttcg gttgcctacc ctgtagatat gtggatgaag agtctaacta gaataatgac
2461 ttgtaaaccc accatgagtt atttggtttt tgacttaaat tcctatttga atcccctttc
2521 ccggaatttt aagtgtctct acaactttga ataaagggaa atgcccccaa gaaaaaaaaa
2581 aaaaaaa
//