LOCUS BC035036 4728 bp mRNA linear HUM 23-NOV-2007
DEFINITION Homo sapiens peptidase M20 domain containing 2, mRNA (cDNA clone
MGC:33973 IMAGE:5262128), complete cds.
ACCESSION BC035036
VERSION BC035036.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4728)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4728)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: g Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58082084.
FEATURES Location/Qualifiers
source 1..4728
/db_xref="H-InvDB:HIT000093649"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33973 IMAGE:5262128"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4728
/gene="PM20D2"
/gene_synonym="bA63L7.3"
/db_xref="GeneID:135293"
/db_xref="HGNC:HGNC:21408"
CDS 99..1409
/gene="PM20D2"
/gene_synonym="bA63L7.3"
/codon_start=1
/product="peptidase M20 domain containing 2"
/protein_id="AAH35036.2"
/db_xref="GeneID:135293"
/db_xref="HGNC:HGNC:21408"
/translation="MRPGGERPVEGGACNGRSELELLKLRSAECIDEAAERLGALSRA
IWSQPELAYEEHHAHRVLTHFFEREPPAASWAVQPHYQLPTAFRAEWEPPEARAPSAT
PRPLHLGFLCEYDALPGIGHACGHNLIAEVGAAAALGVRGALEGLPRPPPPVKVVVLG
TPAEEDGGGKIDLIEAGAFTNLDVVFMAHPSQENAAYLPDMAEHDVTVKYYGKASHSA
SYPWEGLNALDAAVLAYNNLSVFRQQMKPTWRVHGIIKNGGVKPNIIPSYSELIYYFR
APSMKELQVLTKKAEDCFRAAALASGCTVEIKGGAHDYYNVLPNKSLWKAYMENGRKL
GIEFISEDTMLNGPSGSTDFGNVSFVVPGIHPYFHIGSNALNHTEQYTEAAGSQEAQF
YTLRTAKALAMTALDVIFKPELLEGIREDFKLKLQEEQFVNAVE"
BASE COUNT 1369 a 879 c 1005 g 1475 t
ORIGIN
1 agcgggtcct ggaggcctct gggcgcgtgc gcgggcggtc gctacctgcg gccgagccag
61 ggagcgagag ggcgcagagg gcagcgggct tgggcagcat gaggcccgga ggggagcggc
121 ccgtggaagg gggcgcgtgc aatggccgct ccgagctgga gctactgaag ctgcgctcgg
181 cggagtgcat cgacgaggcg gccgagcggc tgggggccct gagccgcgcg atctggagcc
241 agcccgagct ggcctacgag gagcaccatg cccaccgcgt gctgacgcac ttcttcgagc
301 gggagccgcc cgcggcctcc tgggcagtgc agccgcacta ccagctgccc acggccttcc
361 gcgccgagtg ggagccgccg gaggcccggg caccgagcgc cacgccacgc ccgctgcacc
421 tgggcttcct ctgcgagtac gacgcgctgc ccggcatcgg ccacgcctgc ggccacaacc
481 tcatcgctga ggtcggggcg gcggccgcgc tgggcgtgag gggggcctta gagggcctcc
541 ccaggccgcc tccgcccgtg aaggtagttg tcctgggaac ccctgcagaa gaagatggtg
601 gtggcaaaat tgatttaatt gaagcagggg cttttacaaa tcttgatgtt gtttttatgg
661 cccacccatc acaagagaat gctgcttatc taccagatat ggctgaacat gatgtgactg
721 tgaaatacta tggaaaagca tctcattctg cttcttatcc ctgggaagga ttaaatgcat
781 tagatgctgc tgtgctggcc tataacaatc tgtctgtgtt cagacagcaa atgaaaccaa
841 cctggagagt tcatggtata ataaaaaatg gtggtgtaaa acccaatatc attccctctt
901 attctgaatt aatctattac ttccgtgcac cctcaatgaa agaacttcaa gttttgacca
961 aaaaggcaga agattgcttc agagctgcag ctttggcttc agggtgcaca gtggaaatta
1021 aaggtggagc acatgattat tacaatgttc ttcccaataa gagcctatgg aaagcctata
1081 tggaaaatgg aagaaagcta ggaatagagt tcatttcaga agatacaatg ttgaatggcc
1141 cttcaggatc tacggatttt ggaaatgtta gttttgtggt tcctggaatt catccatatt
1201 ttcacattgg atctaatgcc ttgaatcata ctgaacagta cactgaagct gctgggtcac
1261 aggaagctca gttctacact ctgcggacgg ccaaagctct ggcaatgacg gcactggatg
1321 ttatttttaa accagagtta ctggaaggaa tcagagagga ctttaaactg aaacttcaag
1381 aagaacagtt tgtaaatgca gtagaataaa agacttaggg gccacttata aatcaagaag
1441 acgtgatgat ttttttcttt taatctcttt taatgaaggc atgcttgttt tttaatctta
1501 aaggagtaaa attcttttac ctgataagtg aggacagggt gtggagaaaa catattaatt
1561 acctcatatc taaagtgaaa atttttgcaa atccgtactt gataggatta tgatattaca
1621 ggagctggta tgtgatgcca ttctttcttt ttttttaccc cgcaaccact caccttcaca
1681 gtagtgatac catttcttaa cctggaggat acatggcatc atttttataa aatatgttag
1741 taaacctttt tgtaagcctt aaatgttatg tgtattttta aaagcttaag agatttcaaa
1801 ccttatattc agaattgaca cccatgagag tgttttgtgg tatagggtgg taaacttgtt
1861 ctctaatcgt atattaattc ctctaccaga ttgtatattt gaagccagtg tctttccttt
1921 ttttgtttta agatagagcc tcgctctgtt gcccaggctg aagtgtagtg gcacaatctc
1981 ggctcactgc aacctctgcc tcccaggttc aagtgattct cctgcctcag cctaccaagt
2041 agctgggatt acaggtgtgt ggcaccatgc ccagctaatt tttgtatttt tagtagagac
2101 ggcatttcac catgttggcc aggctggtct cgaactcctg acctcaggtg atgcacctgc
2161 ctcggcctcc taaagtgctg ggattacagg catgagccac cgcacccggc ctgccagtgt
2221 ctttttaata cacatgtgtg ttggtatttt taaattgtta cagtatctag catattgctt
2281 actctgaata ttcagtactt tttgaataag caaatattgc ttccttgctt ggaatcatca
2341 gagtttaaag tagcttcgtg gatggaccat gatcctaaga tgagttttaa ttttgtgttt
2401 acagtcatct cttgtacaac gtggagaaga aaagatatac ttactacttt gcttcaggta
2461 cacataagaa aacctctttt ttaaaaaaat ttttattttt ttacataata gagacagggg
2521 ctcgctgtag cttccaggct ggcctcaaac tcctgggctc aagcaatcct cctgtcttgg
2581 cctcccaaag tgttgggatt tcaggtatga gacaccacac ctgcccattt ttgtttggtt
2641 ttttaatggg caggttcttg ctctcccagg ctggagtgca gtggtgtaat cacagctcac
2701 tgcagtctcg aactcctgga ctcaagcagt cctcccacct cagcctccta aagcactggg
2761 attacaggct tgaggcactg cacctggccc tgaccatttt ttaaaaaggt taggcttagt
2821 gcaaagttta aaattatatg attcttaaaa tactgaatta gtttctaaac taaactagag
2881 gtataggtgg acctgcttga ggtatctttg tttttatgga acatttttat tacatgcctt
2941 tataattttt cattgttcac accctgtact gaaacctttt tctcaaatac caactcttgg
3001 ctatgttaaa tttgtagact ttaaaagatg ttatctaaat taatggttta aatatacaaa
3061 ttgaaaatat tttcttttta gtggcaattt taaaagcagg ccttaatatg ggacctgctt
3121 ttaaagtaaa atatgtggta ctatgaatta ctaaattgct atataccatg taatagtgag
3181 tatagctaat atttagtatg ccttttaaaa attttggact gcttttcggt tttaacaaat
3241 tctccacatg tgaactactc aagaaatttt ccctttttaa ttgcctctat agcactcata
3301 agagctaggg cattaggata aactagaata ttttatgttt atgaatactt gtataaactt
3361 aaaagtgttt tgatttccca caatttccca aaggaatgtt tatttattaa gagttgtgtt
3421 gataatttaa ctgttacaat ttcagcagtt gaattcagtg aacactggtt gaggagtgcc
3481 tatttctaag cactgggtgt aagaagaaaa gacacttgca aaggaagagc taagattaac
3541 ataatttctt tggtttttct attgcttgtt attattatgt aaaaactggg tggcagttca
3601 caaggaagat tgttgtaaca gaagagtgac aaccaatagt tttttgatca ttaaatcaaa
3661 ttttgtaaac agtggcagga gcgtggactt aaaacaaggc ttgcttattt ggttttgtca
3721 aagttttatg aaaatatatg atatatattt atactaaaac tatataatcc ttagatttag
3781 gaaagcaatc agttaatgtc tttagcacac taaagcagta ttaaacacag gtacaagttg
3841 gaaattgtag aaaactgaaa gaaaacaaga caaaatgtct atggtaggga ataaaagagt
3901 ttaagatatt atgtaaaatt atgtgtattt tcttctcttt tacataaatt gtttgtgaaa
3961 agtgtgctca acttttttac aagagtgata ttaacttgga tttatttttc aatataattt
4021 ggagaccctt tgttatccaa ataaaattga tgagtttctg tgcctgtaaa aaaaaaaaaa
4081 aaaaaaagaa aagaaaagaa aagacactgt tgcatgcccc agaaagcttg tggtgggtgg
4141 taagttctca cgagatttat ttatctgagc aacattggga ctgagggaac atctgaaagc
4201 taccatcttg aaaatttttg aggaagtgtt tctgaaatat ttaaaaatac ttaagtcagt
4261 cattttgaac aaaagaaatt gatacaataa gttttttttt ttaaggatga ttgtctaatt
4321 ttgtaatatg ttgtttttta aaaacctgtc tgatggtgtt ttatacattt ctaacttttt
4381 acctgagtta tctctttagt cttttggaaa ataccctaca caatactaac ctttaaaact
4441 atcaaatttt tgttataaga taaatgttat ctttgtacta gatagcaacc ctttataagg
4501 ttgtaaggta taataaactg cttatttttt tacatacttc atatcaagca ttttgcagtc
4561 caattatata gttgaggatg gtgtattttg atatgtatga agttaatatt ttcaagtaag
4621 caatcagtct actaccatca gattataagc ttttttgtaa taataggtac ataaaatgtg
4681 tatgaaaaat ctacaataaa catgtttatc tgaaaaaaaa aaaaaaaa
//