LOCUS BC035028 2219 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens serpin peptidase inhibitor, clade D (heparin
cofactor), member 1, mRNA (cDNA clone MGC:33758 IMAGE:5262187),
complete cds.
ACCESSION BC035028
VERSION BC035028.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2219)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2219)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC035028.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: g Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7262380.
FEATURES Location/Qualifiers
source 1..2219
/db_xref="H-InvDB:HIT000051310"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33758 IMAGE:5262187"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2219
/gene="SERPIND1"
/gene_synonym="D22S673"
/gene_synonym="HC2"
/gene_synonym="HCII"
/gene_synonym="HLS2"
/gene_synonym="LS2"
/db_xref="GeneID:3053"
/db_xref="HGNC:HGNC:4838"
/db_xref="MIM:142360"
CDS 50..1549
/gene="SERPIND1"
/gene_synonym="D22S673"
/gene_synonym="HC2"
/gene_synonym="HCII"
/gene_synonym="HLS2"
/gene_synonym="LS2"
/codon_start=1
/product="serpin peptidase inhibitor, clade D (heparin
cofactor), member 1"
/protein_id="AAH35028.1"
/db_xref="GeneID:3053"
/db_xref="HGNC:HGNC:4838"
/db_xref="MIM:142360"
/translation="MKHSLNALLIFLIITSAWGGSKGPLDQLEKGGETAQSADPQWEQ
LNNKNLSMPLLPADFHKENTVTNDWIPEGEEDDDYLDLEKIFSEDDDYIDIVDSLSVS
PTDSDVSAGNILQLFHGKSRIQRLNIVNAKFAFNLYRVLKDQVNTFDNIFIAPVGIST
AMGMISLGLKGETHEQVHSILHFKDFVNASSKYEITTIHNLFRKLTHRLFRRNFGYTL
RSVNDLYIQKQFPILLDFKTKVREYYFAEAQIADFSDPAFISKTNNHIMKLTKGLIKD
ALENIDPATQMMILNCIYFKGSWVNKFPVEMTHNHNFRLNEREVVKVSMMQTKGNFLA
ANDQELDCDILQLEYVGGISMLIVVPHKMSGMKTLEAQLTPGVVERWQKSMTNRTREV
LLPKFKLEKNYNLVESLKLMGIRMLFDKNGNMAGISDQRIAIDLFKHQGTITVNEEGT
QATTVTTVGFMPLSTQVRFTVDRPFLFLIYEHRTSCLLFMGRVANPSRS"
BASE COUNT 624 a 586 c 505 g 504 t
ORIGIN
1 atctctgaag cgccacttct cagaaacaca gagctttagc tccgccaaaa tgaaacactc
61 attaaacgca cttctcattt tcctcatcat aacatctgcg tggggtggga gcaaaggccc
121 gctggatcag ctagagaaag gaggggaaac tgctcagtct gcagatcccc agtgggagca
181 gttaaataac aaaaacctga gcatgcctct tctccctgcc gacttccaca aggaaaacac
241 cgtcaccaac gactggattc cagaggggga ggaggacgac gactatctgg acctggagaa
301 gatattcagt gaagacgacg actacatcga catcgtcgac agtctgtcag tttccccgac
361 agactctgat gtgagtgctg ggaacatcct ccagcttttt catggcaaga gccggatcca
421 gcgtcttaac atcgtcaacg ccaagttcgc tttcaacctc taccgagtgc tgaaagacca
481 ggtcaacact ttcgataaca tcttcatagc acccgttggc atttctactg cgatgggtat
541 gatttcctta ggtctgaagg gagagaccca tgaacaagtg cactcgattt tgcattttaa
601 agactttgtt aatgccagca gcaagtatga aatcacgacc attcataatc tcttccgtaa
661 gctgactcat cgcctcttca ggaggaattt tgggtacaca ctgcggtcag tcaatgacct
721 ttatatccag aagcagtttc caatcctgct tgacttcaaa actaaagtaa gagagtatta
781 ctttgctgag gcccagatag ctgacttctc agaccctgcc ttcatatcaa aaaccaacaa
841 ccacatcatg aagctcacca agggcctcat aaaagatgct ctggagaata tagaccctgc
901 tacccagatg atgattctca actgcatcta cttcaaagga tcctgggtga ataaattccc
961 agtggaaatg acacacaacc acaacttccg gctgaatgag agagaggtag ttaaggtttc
1021 catgatgcag accaagggga acttcctcgc agcaaatgac caggagctgg actgcgacat
1081 cctccagctg gaatacgtgg ggggcatcag catgctaatt gtggtcccac acaagatgtc
1141 tgggatgaag accctcgaag cgcaactgac acccggggtg gtggagagat ggcaaaaaag
1201 catgacaaac agaactcgag aagtgcttct gccgaaattc aagctggaga agaactacaa
1261 tctagtggag tccctgaagt tgatggggat caggatgctg tttgacaaaa atggcaacat
1321 ggcaggcatc tcagaccaaa ggatcgccat cgacctgttc aagcaccaag gcacgatcac
1381 agtgaacgag gaaggcaccc aagccaccac tgtgaccacg gtggggttca tgccgctgtc
1441 cacccaagtc cgcttcactg tcgaccgccc ctttcttttc ctcatctacg agcaccgcac
1501 cagctgcctg ctcttcatgg gaagagtggc caaccccagc aggtcctaga ggtggaggtc
1561 taggtgtctg aagtgccttg ggggcaccct cattttgttt ccattccaac aacgagaaca
1621 gagatgttct ggcatcattt acgtagttta cgctaccaat ctgaattcga ggcccatatg
1681 agaggagctt agaaacgacc aagaagagag gcttgttgga atcaattctg cacaatagcc
1741 catgctgtaa gctcatagaa gtcactgtaa ctgtagtgtg tctgctgtta cctagagggt
1801 ctcacctccc cactcttcac agcaaacctg agcagcgcgt cctaagcacc tcccgctccg
1861 gtgaccccat ccttgcacac ctgactctgt cactcaagcc tttctccacc aggcccctca
1921 tctgaatacc aagcacagaa atgagtggtg tgactaattc cttacctctc ccaaggaggg
1981 tacacaacta gcaccattct tgatgtccag ggaagaagcc acctcaagac atatgagggg
2041 tgccctgggc taatgttagg gcttaatttt ctcaaagcct gacctttcaa atccgtgatg
2101 aatgccatca gtccctcctg ctgttgcctc cctgtgacct ggaggacagt gtgtgccatg
2161 tctcccatac tagagataaa taaatgtagc cacatttact gtgaaaaaaa aaaaaaaaa
//