LOCUS BC035026 2136 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 47, member B, mRNA
(cDNA clone MGC:33660 IMAGE:4828379), complete cds.
ACCESSION BC035026
VERSION BC035026.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2136)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2136)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC035026.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749288.
FEATURES Location/Qualifiers
source 1..2136
/db_xref="H-InvDB:HIT000093643"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33660 IMAGE:4828379"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2136
/gene="FAM47B"
/gene_synonym="FLJ35782"
/db_xref="GeneID:170062"
/db_xref="HGNC:HGNC:26659"
CDS 37..1974
/gene="FAM47B"
/gene_synonym="FLJ35782"
/codon_start=1
/product="family with sequence similarity 47, member B"
/protein_id="AAH35026.1"
/db_xref="GeneID:170062"
/db_xref="HGNC:HGNC:26659"
/translation="MGDRRPQDRPRSQGMDSKPWYCDKPPSKYFAKRKHRRLRFPPVD
TQNWVFVTEGMDDFRYACQSPEDTLVCRRDEFLLPKISLRGPQADRKSRKKKLLKKAA
LFSELSPVQPARKAFVEEVEAQLMTKHPLAMYPNLGKDMPPDLLLQVLKQLDPERKLE
DAWARCEAREKTTEVPTESGKYPCGESCPRPPETPVSRLRPHLPKTPVSSRRPEPPKT
RVSSLRPEPPKTRVSSLHPEPPETRASHLRVDPPETGVSHLCPEPPKTLVSSVHPEPP
DTGASHLCPEPPETRVSHLHPEPPETGVSHLRPEPSKTQVSSLCPEPPEAGVSHLCLE
PPNTHRVSSFLLQVLKLDSEKKLEDARARCEGQEMTTEELTKPGKYHFWESCPRPFES
RMPHLRLVLPITRRMASLCLKPPKTRRVSSLCPEPTKTGASHLKELFQEDTPSTMECV
SDSLQRRHTSRKLRDFKWAGDLGVNEESISSLFDFTPECRTTDQDQKIKKANECASRL
MYGMELDDMDEVEFLRIKYWDRRRRAAPHSYSAQRGRIRYGPWYFEPKLGKKLRSDEP
LIDPKPVLEKPDEPDILDGLYGPIAFKDFILSKGYRMPGVIEKLFAKKGWTYDSVKTP
IQRAVQVYKYKEDVTDASKED"
BASE COUNT 545 a 595 c 539 g 457 t
ORIGIN
1 agaagctgga gaggtggcac aacagagagg gccaccatgg gggaccggag gccacaggac
61 cggccaaggt cccaaggcat ggactccaag ccctggtact gtgacaaacc gccttccaag
121 tacttcgcga agcgcaagca caggcgcctg aggttcccgc ctgtggacac ccagaactgg
181 gtatttgtga cggagggcat ggacgacttc cgctacgcct gtcagtctcc tgaagatacg
241 cttgtttgtc gccgtgacga gtttttactc cccaaaatat ctctcagagg tccccaagct
301 gaccgcaaaa gcaggaagaa aaagctgctc aagaaagcgg ccctattttc cgagctctcg
361 ccagtacagc cagcacggaa ggcgttcgta gaggaagtgg aagcccagct gatgaccaag
421 catcccttgg ccatgtaccc caatctggga aaagatatgc ctccagatct cctactacag
481 gtgctgaaac agctggatcc cgagaggaag ctggaggacg cttgggctcg ttgtgaggcc
541 cgggagaaga caaccgaggt acccaccgag tctggtaaat atccctgtgg ggaatcctgc
601 ccgcggcctc ccgagactcc ggtgtcccgt ctccgtcctc atcttcccaa gactccggtg
661 tccagtcgcc gcccagagcc tcccaagact cgggtgtcca gtctccgccc agagcctccc
721 aagactcggg tgtccagtct ccacccggaa cctccagaga ctcgcgcatc tcatctccgc
781 gtggatcctc ccgagactgg agtgtcccat ctctgcccag agcctcccaa gactctggtg
841 tccagtgtcc acccagagcc tcctgatact ggagcgtccc atctctgccc ggagcctccc
901 gagactcgcg tatctcatct ccacccggag cctcctgaga ctggagtgtc ccatctccgc
961 ccagagcctt ccaagactca ggtgtccagt ctctgcccgg agcctcccga ggctggagtg
1021 tcccatctct gcctggaacc tcccaacact catcgggtgt ccagtttcct actacaggtg
1081 ctgaaactgg attctgagaa gaagctggaa gacgcacggg ctcgttgtga gggccaggag
1141 atgacaaccg aggaactcac caagcctggt aaataccatt tttgggaatc ctgtccgcgg
1201 ccttttgaga gtcggatgcc ccatctccgc ctggtgcttc ccataactcg tcgaatggcc
1261 agtctctgcc tgaagcctcc caagactcgt cgggtgtcca gtctctgccc ggagcctacc
1321 aagaccggag cgtcccatct aaaagaactg tttcaggaag atacaccaag cacaatggag
1381 tgtgtttctg actctcttca acgtagacac acatcgagaa aactccgtga cttcaagtgg
1441 gctggagacc taggagttaa tgaagaatcc atcagcagtc tgtttgactt tacccctgag
1501 tgcagaacaa ccgatcaaga ccaaaagatt aagaaggcaa acgagtgtgc ttcaaggctg
1561 atgtacggca tggagctaga cgacatggat gaggtcgaat tcttacggat aaaatactgg
1621 gacaggagac gccgggcggc accgcattct tatagtgcac agcgtgggag gataaggtat
1681 ggaccatggt acttcgagcc taagttgggg aaaaagctaa gaagtgatga acctttgatt
1741 gaccccaagc ccgtacttga aaagcctgat gaacccgaca ttcttgacgg tctttatgga
1801 ccaattgcct ttaaggattt cattctaagc aagggctaca gaatgcctgg cgtcattgaa
1861 aagctgtttg ccaagaaggg atggacttac gactctgtta agactcctat tcaacgtgca
1921 gtgcaagttt acaagtacaa agaagacgtc acagatgcat caaaagaaga ttagatggtt
1981 ttcaatttac tgcttacttg ggtatttctt gctctcattc taaacatcaa tcagaattta
2041 tgatgactgg ccccgtgaat gtacaacttt ggcaacatct gtaaattcaa tacccaatgc
2101 ttataaatat gtcttaatga aaaaaaaaaa aaaaaa
//