LOCUS BC035024 2670 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 16 open reading frame 71, mRNA (cDNA clone
MGC:33631 IMAGE:4826923), complete cds.
ACCESSION BC035024
VERSION BC035024.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2670)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2670)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: o Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59710084.
FEATURES Location/Qualifiers
source 1..2670
/db_xref="H-InvDB:HIT000051309"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33631 IMAGE:4826923"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2670
/gene="C16orf71"
/gene_synonym="FLJ43261"
/db_xref="GeneID:146562"
/db_xref="HGNC:HGNC:25081"
CDS 413..1975
/gene="C16orf71"
/gene_synonym="FLJ43261"
/codon_start=1
/product="chromosome 16 open reading frame 71"
/protein_id="AAH35024.1"
/db_xref="GeneID:146562"
/db_xref="HGNC:HGNC:25081"
/translation="MASNDKGMAPSLGSPWASRMGPWDAILKAVKDQLPSLDSDSPLS
DYGEEELFIFQRNQTSLIPDLSEELAEDPADGDKSRAWVAAAEESLPEPVLVPAELAT
EPGCRQNTRTKDASSQEGRDPGRPFESSGEVSALLGMAEEPPRWLEGDLGSLSFNTKG
SQGPPWDPQAEATLSCHEGDPKAEPLSTASQESVNRRALRQERRKMIETDILQKVTRD
ACGPTSSDKGGVKEAPCHAAESAPRSKMPLVEPPEGPPVLSLQQLEAWDLDDILQSLA
GQEDNQGNRAPGTVWWAADHRQVQDCMVPSAHNRLMEQLALLCTTQSKASACARKVPA
DTPQDTKEADSGSRCASRKRGSQAGPGPQLAQGMRLNAESPTIFIDLRQMELPDHLSP
ESSSHSSSDSEEEEEEEMAALGDAEGASPSSLGLRTCTGKSQLLQQLRAFQKGTAQPE
LPASKGPAGGRAQALEDTAGSRTGRKQHMKLCAKGQSAQARLPRGRPRALGDVPEPGA
AREALMPPLEQL"
BASE COUNT 584 a 828 c 806 g 452 t
ORIGIN
1 agcggaatgc acacgtcccg cacccggacc ttccggtcag cttcccggct cgctgtctga
61 tgcccgcggt agccaatgag ctagtggtgt ttgtcctgct ccgtccccgc cctccagggg
121 aaccaatccc attgcaggag aggcaggacg cgcaaaggcc cgaaagagga gctgggcggg
181 gtggggggaa ggcggaggca gtctagtaat gtaaagctcc gctgagaggg agagtgctga
241 agaaggggac agcctctgta cctgcggcgc ggcccgaggg gcggacgcga gcggactgac
301 gcgctggagg ctgtttatag cgctgtcagg acagcgcggg gagtggaggc agaggcctga
361 gagctccccg gattatggtg cactgagaag gcatctggaa gcctgggccc tcatggcatc
421 caacgataaa ggcatggcac cctcgctggg ctctccctgg gcctcccgga tggggccctg
481 ggatgccatc ctcaaggctg tcaaagacca gctcccgtct ctggactcag actccccttt
541 gtcggactat ggggaagagg agctgttcat cttccagcga aaccaaacct ccctgattcc
601 agacctgtcg gaggagctgg ctgaagatcc tgccgatggc gacaagtcca gggcctgggt
661 cgctgcagct gaagagtccc ttcccgagcc agttctggtg cctgcagaat tggccacaga
721 acctgggtgc agacagaaca caaggacaaa ggatgcatcc tctcaggaag gaagagaccc
781 tggcaggcct tttgaaagct ctggtgaagt cagcgctctt cttgggatgg ccgaggagcc
841 ccccaggtgg ctggaaggcg accttggaag cctgtctttc aacaccaaag gatcccaggg
901 tcctccctgg gacccacagg ccgaagccac tctctcctgc catgaaggag acccaaaggc
961 agagcccctc agcactgcct cacaagaatc tgtgaaccgc cgggccctcc gacaggagag
1021 aaggaagatg atagagacgg acatcctcca gaaagtcacc cgggatgcct gcggcccgac
1081 cagcagtgac aaaggtgggg tgaaggaggc gccctgccac gctgcggagt cagctcccag
1141 atccaaaatg cccctcgtgg agcctccgga gggaccacca gtgctctcgc tccagcaact
1201 tgaagcgtgg gatttggatg acatccttca gagtctggcg ggacaagaag acaaccaggg
1261 aaatcgtgca cctggaactg tgtggtgggc agctgaccac cgccaagttc aagactgcat
1321 ggtgccgagc gcccacaaca ggctcatgga acagctggcc ctcctgtgca ccacgcagtc
1381 caaggcctct gcttgtgccc ggaaggtgcc tgccgacact ccccaggaca ccaaagaggc
1441 agattcagga agcagatgtg cctcaaggaa gcggggctcc caggctgggc caggcccgca
1501 gctggcccag ggcatgaggc ttaacgcaga gtcccccacc atctttattg acctgcggca
1561 gatggagcta ccagaccacc tgtccccaga aagctccagc cacagctcct ctgacagtga
1621 ggaggaggag gaggaagaga tggcagctct gggagacgca gagggggcat ctccttcctc
1681 cctggggcta cggacctgta ccgggaaaag ccagcttctc cagcagctca gggcctttca
1741 gaaggggaca gcccagcccg agctgcctgc cagcaagggg cccgcgggtg ggagggctca
1801 ggcccttgaa gacacagctg gatcacgaac tgggaggaag caacacatga agctctgtgc
1861 caaggggcag agcgcccagg ctcgactccc aagaggcagg cccagagccc tgggggatgt
1921 tcctgagcca ggggcagcca gggaggccct gatgcctcct ctggagcaac tatagctgcc
1981 tcaggatgtg tcctgctgtc tgccccgtgg gaagagcaga gaaatcatca ccaccttggg
2041 ccccacggtg ccacgggctc aggcagcaca gtagggcgcc gggcctttgg gacagtgtcc
2101 cagcttcccc tggggttcac ccctggctgc caggccactg aggatgggca ggggtctctt
2161 ctcatcaagc cttgtaccag gcaaaagaca ggccctgctt ggccgtggtc actggccgcc
2221 aagatcaggg ctacagatgt ctgctctctg gaccccacgt gatctggcca ctggggacac
2281 ccacccgacc ccactcccag tgatgagggg cattttcatt gcaagtcaaa ggcaagacag
2341 gcttccataa agtcccagga ggtccctcct gtagggcaca aggccaggct gcctcccagc
2401 ccccaggccc tctcccacct acagagaccc tcccctgccc cctccactcc ggggcctgtg
2461 ccgccagaac cgggctctgc ccccatacgc tgccctcgca gcctggcggc ctccgctgtg
2521 gctgcctagc tgtcaagagc aaaggctttt tttttcttca accccatttt cttccatttc
2581 tcccaccttt ttaatgccag taacctcact gagaatgttt tacagtgatg gaaaataaac
2641 tctgttccaa gttcaaaaaa aaaaaaaaaa
//