LOCUS BC035009 3308 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens delta/notch-like EGF repeat containing, mRNA (cDNA
clone MGC:33398 IMAGE:4820343), complete cds.
ACCESSION BC035009
VERSION BC035009.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3308)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3308)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542542.
FEATURES Location/Qualifiers
source 1..3308
/db_xref="H-InvDB:HIT000051299"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33398 IMAGE:4820343"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3308
/gene="DNER"
/gene_synonym="bet"
/gene_synonym="UNQ26"
/db_xref="GeneID:92737"
/db_xref="HGNC:HGNC:24456"
/db_xref="MIM:607299"
CDS 138..2351
/gene="DNER"
/gene_synonym="bet"
/gene_synonym="UNQ26"
/codon_start=1
/product="delta/notch-like EGF repeat containing"
/protein_id="AAH35009.1"
/db_xref="GeneID:92737"
/db_xref="HGNC:HGNC:24456"
/db_xref="MIM:607299"
/translation="MQPRRAQAPGAQLLPALALLLLLLGAGPRGSSLANPVPAAPLSA
PGPCAAQPCRNGGVCTSRPEPDPQHPAPAGEPGYSCTCPAGISGANCQLVADPCASNP
CHHGNCSSSSSSSSDGYLCICNEGYEGPNCEQALPSLPATGWTESMAPRQLQPVPATQ
EPDKILPRSQATVTLPTWQPKTGQKVVEMKWDQVEVIPDIACGNASSNSSAGGRLVSF
EVPQNTSVKIRQDATASLILLWKVTATGFQQCSLIDGRSVTPLQASGGLVLLEEMLAL
GNNHFIGFVNDSVTKSIVALRLTLVVKVSTCVPGESHANDLECSGKGKCTTKPSEATF
SCTCEEQYVGTFCEEYDACQRKPCQNNASCIDANEKQDGSNFTCVCLPGYTGELCQSK
IDYCILDPCRNGATCISSLSGFTCQCPEGYFGSACEEKVDLCASSPCQNNGTCYVDGV
HFTCNCSPGFTGPTCAQLIDFCALSPCAHGTCRSVGTSYKCLCDPGYHGLYCEEEYNE
CLSAPCLNAATCRDLVNGYECVCLAEYKGTHCELYKDPCANVSCLNGATCDSDGLNGT
CICAPGFTGEECDIDINECDSNPCHHGGSCLDQPNGYNCHCPHGWVGANCEIHLQWKS
GHMAESLTNMPRHSLYIIIGALCVAFILMLIILIVGICRISRIEYQGSSRPAYEEFYN
CRSIDSEFSNAIASIRHARFGKKSRPAMYDVSPIAYEDYSPDDKPLVTLIKTKDL"
BASE COUNT 829 a 837 c 811 g 831 t
ORIGIN
1 agcggagctg caggaggcgc ccggcccggc ggagcagccc tagccgccac cgtcgctctc
61 gcagctctcg tcgccactgc caccgccgcc gccgtcactg cgtcctggct ccggctcccg
121 cgccctcccg gccggccatg cagccccgcc gcgcccaggc gcccggtgcg cagctgctgc
181 ccgcgctggc cctgctgctg ctgctgctcg gagcggggcc ccgaggcagc tccctggcca
241 acccggtgcc cgccgcgccc ttgtctgcgc ccgggccgtg cgccgcgcag ccctgccgga
301 atgggggtgt gtgcacctcg cgccctgagc cggacccgca gcacccggcc cccgccggcg
361 agcctggcta cagctgcacc tgccccgccg ggatctccgg cgccaactgc cagcttgttg
421 cagatccttg tgccagcaac ccttgtcacc atggcaactg cagcagcagc agcagcagca
481 gcagcgatgg ctacctctgc atttgcaatg aaggctatga aggtcccaac tgtgaacagg
541 cacttcccag tctcccagcc actggctgga ccgaatccat ggcaccccga cagcttcagc
601 ctgttcctgc tactcaggag cctgacaaaa tcctgcctcg ctctcaggca acggtgacac
661 tgcctacctg gcagccgaaa acagggcaga aagttgtaga aatgaaatgg gatcaagtgg
721 aggtgatccc agatattgcc tgtgggaatg ccagttctaa cagctctgcg ggtggccgcc
781 tggtatcctt tgaagtgcca cagaacacct cagtcaagat tcggcaagat gccactgcct
841 cactgatttt gctctggaag gtcacggcca caggattcca acagtgctcc ctcatagatg
901 gacgaagtgt gacccccctt caggcttcag ggggactggt cctcctggag gagatgctcg
961 ccttggggaa taatcacttt attggttttg tgaatgattc tgtgactaag tctattgtgg
1021 ctttgcgctt aactctggtg gtgaaggtca gcacctgtgt gccgggggag agtcacgcaa
1081 atgacttgga gtgttcagga aaaggaaaat gcaccacgaa gccgtcagag gcaacttttt
1141 cctgtacctg tgaggagcag tacgtgggta ctttctgtga agaatacgat gcttgccaga
1201 ggaaaccttg ccaaaacaac gcgagctgta ttgatgcaaa tgaaaagcaa gatgggagca
1261 atttcacctg tgtttgcctt cctggttata ctggagagct ttgccagtcc aagattgatt
1321 actgcatcct agacccatgc agaaatggag caacatgcat ttccagtctc agtggattca
1381 cctgccagtg tccagaagga tacttcggat ctgcttgtga agaaaaggtg gacctctgcg
1441 cctcgtctcc gtgccagaac aacggcacct gctatgtgga cggggtacac tttacctgca
1501 actgcagccc gggcttcaca gggccgacct gtgcccagct tattgacttc tgtgccctca
1561 gcccctgtgc tcatggcacg tgccgcagcg tgggcaccag ctacaaatgc ctctgtgatc
1621 caggttacca tggcctctac tgtgaggagg aatataatga gtgcctctcc gctccatgcc
1681 tgaatgcagc cacctgcagg gacctcgtta atggctatga gtgtgtgtgc ctggcagaat
1741 acaaaggaac acactgtgaa ttgtacaagg atccctgcgc taacgtcagc tgtctgaacg
1801 gagccacctg tgacagcgac ggcctgaatg gcacgtgcat ctgtgcaccc gggtttacag
1861 gtgaagagtg cgacattgac ataaatgaat gtgacagtaa cccctgccac catggtggga
1921 gctgcctgga ccagcccaat ggttataact gccactgccc gcatggttgg gtgggagcaa
1981 actgtgagat ccacctccaa tggaagtccg ggcacatggc ggagagcctc accaacatgc
2041 cacggcactc cctctacatc atcattggag ccctctgcgt ggccttcatc cttatgctga
2101 tcatcctgat cgtggggatt tgccgcatca gccgcattga ataccagggt tcttccaggc
2161 cagcctatga ggagttctac aactgccgca gcatcgacag cgagttcagc aatgccattg
2221 catccatccg gcatgccagg tttggaaaga aatcccggcc tgcaatgtat gatgtgagcc
2281 ccatcgccta tgaagattac agtcctgatg acaaaccctt ggtcacactg attaaaacta
2341 aagatttgta atcttttttt ggattatttt tcaaaaagat gagatactac actcatttaa
2401 atatttttaa gaaaataaaa agcttaagaa atttaaaatg ctagctgctc aagagttttc
2461 agtagaatat ttaagaacta attttctgca gcttttagtt tggaaaaaat attttaaaaa
2521 caaaatttgt gaaacctata gacgatgttt taatgtacct tcagctctct aaactgtgtg
2581 cttctactag tgtgtgctct tttcactgta gacactatca cgagacccag attaatttct
2641 gtggttgtta cagaataagt ctaatcaagg agaagtttct gtttgacgtt tgagtgccgg
2701 ctttctgagt agagttagga aaaccacgta acgtagcata tgatgtataa tagagtatac
2761 ccgttactta aaaagaagtc tgaaatgttc gttttgtgta aaagaaacta gttaaattta
2821 ctattcctaa cccgaatgaa attagccttt gccttattct gtgcatgggt aagtaactta
2881 tttctgcact gttttgttga actttgtgga aacattcttt cgagtttgtt tttgtcattt
2941 tcgtaacagt cgtcgaacta ggcctcaaaa acatacgtaa cgaaaaggcc tagcgaggca
3001 aattctgatt gatttgaatc tatatttttt tttaaaaagt caagggttct atattgtgag
3061 taaattaaat ttacatttga gttgtttgtt gctaagaggt agtaaatgta agagagtact
3121 ggttccttca gtagtgagta tttctcatag tgcagcttta tttatctcca ggatgttttt
3181 gtggctgtat ttgattgata tgtgcttctt ctgattcttg ctaatttcca accatattga
3241 ataaatgtga tcaagtcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3301 aaaaaaaa
//