LOCUS BC034976 2357 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens solute carrier organic anion transporter family,
member 6A1, mRNA (cDNA clone MGC:26949 IMAGE:4820512), complete
cds.
ACCESSION BC034976
VERSION BC034976.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2357)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2357)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034976.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: a Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30520362.
FEATURES Location/Qualifiers
source 1..2357
/db_xref="H-InvDB:HIT000051276"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26949 IMAGE:4820512"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2357
/gene="SLCO6A1"
/gene_synonym="GST"
/gene_synonym="MGC26949"
/gene_synonym="OATP6A1"
/gene_synonym="OATPY"
/db_xref="GeneID:133482"
CDS 175..2148
/gene="SLCO6A1"
/gene_synonym="GST"
/gene_synonym="MGC26949"
/gene_synonym="OATP6A1"
/gene_synonym="OATPY"
/codon_start=1
/product="SLCO6A1 protein"
/protein_id="AAH34976.1"
/db_xref="GeneID:133482"
/translation="MFVGVARHSGSQDEVSRGVEPLEAARAQPAKDRRAKGTPKSSKP
GKKHRYLRLLPEALIRFGGFRKRKKAKSSVSKKPGEVDDSLEQPCGLGCLVSTCCECC
NNIRCFMIFYCILLICQGVVFGLIDVSIGDFQKEYQLKTIEKLALEKSYDISSGLVAI
FIAFYGDRKKVIWFVASSFLIGLGSLLCAFPSINEENKQSKVGIEGIAECTSMIGYAL
GYVLGAPLVKVPENTTSATNTTVNNGSPEWLWTWWINFLFAAVVAWCTLIPLSCFPNN
MPGSTRIKARKRKQLHFFDSRLKDLKLGTNIKDLCAALWILMKNPVLICLALSKATEY
LVIIGASEFLPIYLENQFILTPTVATTLAGLVLIPGGALGQLLGGVIVSTLEMSCKAL
MRFIMVTSVISLILLVFIIFVRCNPVQFAGINEDYDGTGKLGNLTAPCNEKCRCSSSI
YSSICGRDDIEYFSPCFAGCTYSKAQNQKKMYYNCSCIKEGLITADAEGDFIDARPGK
CDAKCYKLPLFIAFIFSTLIFSGFSGVPIVLAMTRVVPDKLRSLALGVSYVILRIFGT
IPGPSIFKMSGETSCILRDVNKCGHTGRCWIYNKTKMAFLLVGICFLCKLCTIIFTTI
AFFIYKRRLNENTDFPDVTVKNPKVKKKEETDL"
BASE COUNT 674 a 441 c 533 g 709 t
ORIGIN
1 gttttgcctc ctgccctagg agaaacgttc gctctggagg cttgggcggc aagagcccct
61 tgtggccacc gagtcctccg acgccctcgc caggctggcc tttgggttgg cccaggcagg
121 acgggcagcc gagagcactc gggccgcgtc gccaggagcc gcccagggtg agccatgttc
181 gtaggcgtcg cccggcactc tgggagccag gatgaagtct caaggggagt agagccgctg
241 gaggccgcgc gggcccagcc tgctaaggac aggagggcca agggaacccc gaagtcctcg
301 aagcccggga aaaaacaccg gtatctgaga ctacttccag aggccttgat aaggttcggc
361 ggtttccgaa aaaggaaaaa agccaagtcc tcagtttcca agaagccggg agaagtggat
421 gacagtttgg agcagccctg tggtttgggc tgcttagtca gcacctgctg tgagtgttgc
481 aataacattc gctgcttcat gattttctac tgcatcctgc tcatatgtca aggtgtggtg
541 tttggtctta tagatgtcag cattggtgat tttcagaagg aatatcaact gaaaaccatt
601 gagaagttgg cattggaaaa gagttacgat atttcatctg gcctggtagc aatatttata
661 gcattctatg gagacagaaa aaaagtaata tggtttgtag cttcctcctt tttaatagga
721 cttggatcac ttttatgtgc ttttccatcc attaatgaag aaaataaaca aagtaaggta
781 ggaattgaag gtattgcaga atgtacatca atgattggat atgctctggg ttatgtgcta
841 ggagcaccac tagttaaagt ccctgagaat actacttctg caacaaacac tacagtcaat
901 aatggtagtc cagaatggct atggacttgg tggattaatt ttctttttgc cgctgtcgtt
961 gcatggtgta cattaatacc attgtcatgc tttccaaaca atatgccagg ttcaacacgg
1021 ataaaagcta ggaaacgtaa acagcttcat ttttttgaca gcagacttaa agatctgaaa
1081 cttggaacta atatcaagga tttatgtgct gctctttgga ttctgatgaa gaatccagtg
1141 ctcatatgcc tagctctgtc aaaagctaca gaatatttag ttattattgg agcttctgaa
1201 tttttgccta tatatttaga aaatcagttt atattaacac ccactgtggc aactacactt
1261 gcaggacttg ttttaattcc aggaggtgca cttggccagc ttctgggagg tgtcattgtt
1321 tccacattag aaatgtcttg taaagccctt atgagattta taatggttac atctgtgata
1381 tcacttatac tgcttgtgtt tattattttt gtacgctgta atccagtgca atttgctggg
1441 atcaatgaag attatgatgg aacagggaag ttgggaaacc tcacggctcc ttgcaatgaa
1501 aaatgtagat gctcatcttc aatttattct tctatatgtg gaagagatga tattgaatat
1561 ttttctccct gctttgcagg gtgtacatat tctaaagcac aaaaccaaaa aaagatgtac
1621 tacaattgtt cttgcattaa agaaggatta ataactgcag atgcagaagg tgattttatt
1681 gatgccagac ccgggaaatg tgatgcaaag tgctataagt tacctttgtt cattgctttt
1741 atcttttcta cacttatatt ttctggtttt tctggtgtac caatcgtctt ggccatgacg
1801 cgggttgtac ctgacaaact gcgttctctg gccttgggtg taagctatgt gattttgaga
1861 atatttggga ctattcctgg accatcaatc tttaaaatgt caggagaaac ttcttgtatt
1921 ttacgggatg ttaataaatg tggacacaca ggacgttgtt ggatatataa caagacaaaa
1981 atggctttct tattggtagg aatatgtttt ctttgcaaac tatgcactat catcttcact
2041 actattgcat ttttcatata caaacgtcgt ctaaatgaga acactgactt cccagatgta
2101 actgtgaaga atccaaaagt taagaaaaaa gaagaaactg acttgtaact ggatcatcat
2161 tgtgattgca gatcatttga ggatcagagt gtgaaaagga gtttctcttt tacagattct
2221 ccaagatttg tttctgtgcc caactttcag aagaggaaaa tcacacatta tgtttacata
2281 agtagcaaaa atatatttat ggtgatctgc attttcataa taaagtgtcc tattgtgaaa
2341 caaaaaaaaa aaaaaaa
//