LOCUS BC034942 2713 bp mRNA linear HUM 21-JUL-2005 DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, mRNA (cDNA clone MGC:25989 IMAGE:4826417), complete cds. ACCESSION BC034942 VERSION BC034942.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2713) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2713) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC034942.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: n Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13514808. FEATURES Location/Qualifiers source 1..2713 /db_xref="H-InvDB:HIT000051257" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:25989 IMAGE:4826417" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2713 /gene="DDX3Y" /db_xref="GeneID:8653" /db_xref="MIM:400010" CDS 310..2292 /gene="DDX3Y" /codon_start=1 /product="DDX3Y protein" /protein_id="AAH34942.1" /db_xref="GeneID:8653" /db_xref="MIM:400010" /translation="MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLR NREASKGFHDKDSSGWSCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSD YDGIGNRERPGFGRFERSGHSRWCDKSVEDDWSKPLPPSERLEQELFSGGNTGINFEK YDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDL MACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTREL AVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKI GLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLAR DFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKK GADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNV RHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP SWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGG GYGNSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN" BASE COUNT 796 a 509 c 678 g 730 t ORIGIN 1 agaggggtct ggagttccta ggtgaacccc agcagcctaa ccctgtcaag tctgtcgagc 61 ctctggctgg tcacacgtgc tgcggaatcc actcagcttt cctcaggtgc agtcaggtcc 121 atcctgcaga gggaccttct gcggacctgt tctttcacct ccctaacctg aagattgtat 181 tcaaaccacc gtggatcgct cacgtaaaat ggtcactgcg cctaacacct gggatcccgt 241 aacccttatc tatcttggct tcagagagtt ttttgactag ttccaacttt gctgaagctt 301 gtcaaaggga tgagtcatgt ggtggtgaaa aatgaccctg aactggacca gcagcttgct 361 aatctggacc tgaactctga aaaacagagt ggaggagcaa gtacagcgag caaagggcgc 421 tatatacctc ctcacttaag gaacagagaa gcatctaaag gattccatga taaagacagt 481 tcaggttgga gttgcagcaa agataaggat gcatatagca gttttgggtc tcgagattct 541 agaggaaagc ctggttattt cagtgaacgt ggaagtggat caaggggaag atttgatgat 601 cgtggacgga gtgactatga tggtattggc aatcgtgaaa gacctggctt tggcagattt 661 gaacggagtg gacatagtcg ttggtgtgac aagtcagttg aagatgattg gtcaaaacca 721 cttccaccaa gtgaacgctt ggagcaagaa ctgttttctg gaggaaacac ggggattaac 781 tttgagaaat atgatgatat accagtagag gcaaccggca gtaactgtcc tccacatatt 841 gagaatttta gcgatattga catgggagaa attatcatgg ggaacattga acttactcgc 901 tatactcgtc ctactccagt gcaaaaacat gccattccta ttattaaggg aaaaagagac 961 ttaatggctt gtgcccaaac aggatctggg aaaactgcag catttctttt acccatactg 1021 agtcagatat atacagatgg tccaggagaa gctttgaagg ctgtgaagga aaatggaagg 1081 tatgggcgcc gcaaacaata tccaatatcc ttggttttag ccccaacaag agaattggct 1141 gtacagatct atgaggaagc cagaaaattt tcctaccgat ctagagttcg tccttgtgta 1201 gtttatggtg gtgctgatat tggtcagcag attcgggact tagaacgtgg atgccacttg 1261 ttagtagcca ctccaggacg tctagtggat atgatggaaa gaggaaagat tggattagac 1321 ttctgcaagt acttagtgtt ggatgaagct gataggatgc tggatatggg atttgaacct 1381 cagatacgtc gtatagttga acaagatact atgccaccaa agggcgttcg tcacaccatg 1441 atgtttagtg ctacttttcc taaggaaata cagatgcttg ctcgtgactt tttggatgaa 1501 tatatctttt tggctgtagg cagagtaggc tctacctctg agaacatcac acagaaagta 1561 gtttgggtgg aagacttaga taaacggtca tttctactgg acattttagg tgcaacaggg 1621 agtgattcac ttactttagt gtttgtggag accaaaaagg gagcagattc cctggaggat 1681 ttcttatacc atgaaggata tgcttgtact agtattcatg gagaccggtc acagagagat 1741 cgagaggagg cccttcacca gtttcgctca ggaaaaagcc caattctagt ggctacagct 1801 gtggcagcac gaggactaga catttcaaat gtgagacatg ttatcaattt tgatttgcca 1861 agtgatattg aagaatatgt gcatcgtatt ggccgtacag gacgtgtagg aaacctgggc 1921 cttgccacct cattctttaa tgaaaaaaat atgaatatta caaaggattt gttggatctt 1981 cttgtagaag ctaaacaaga agtgccttct tggttggaaa atatggctta tgaacaccac 2041 tacaagggtg gcagtcgtgg acgatctaaa agtaatagat tcagtggagg atttggtgcc 2101 agagactatc gacaaagtag tggttccagc agttctggct ttggtgctag tcgcggaagc 2161 agcagccgca gtggtggagg tggttacggc aacagcagag gatttggtgg aggtggctat 2221 ggaggcttct acaatagtga tggatatgga ggaaattata actcccaggg ggttgactgg 2281 tggggcaact gaatctgctt tgcagcaaag tcacccttac aaagaagcta atatggaaac 2341 cacatgtaac ttagccagac tatattgtgt agcttcaaga acttgcagta cattaccagc 2401 tgtgattctc ctgataattc aagggagctc aaagtcacaa gaagaaaaat gaaaggaaaa 2461 aacagcagcc ctattcagaa attggtttga agatgtaatt gctctagttt ggattaaact 2521 cttcccctcc tgctttagtg ccaccccaaa ctgcatttat aattttgtga ctgaggatcg 2581 tttgtttgtt aacgtactgt gactttaact ttagacaact tactactttg atgtcctgtt 2641 ggctcagtaa tgctcacgat accaattgtt ttgacaaaat aaatttacta aacttggaaa 2701 aaaaaaaaaa aaa //