LOCUS BC034942 2713 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked,
mRNA (cDNA clone MGC:25989 IMAGE:4826417), complete cds.
ACCESSION BC034942
VERSION BC034942.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2713)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2713)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034942.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13514808.
FEATURES Location/Qualifiers
source 1..2713
/db_xref="H-InvDB:HIT000051257"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:25989 IMAGE:4826417"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2713
/gene="DDX3Y"
/db_xref="GeneID:8653"
/db_xref="MIM:400010"
CDS 310..2292
/gene="DDX3Y"
/codon_start=1
/product="DDX3Y protein"
/protein_id="AAH34942.1"
/db_xref="GeneID:8653"
/db_xref="MIM:400010"
/translation="MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLR
NREASKGFHDKDSSGWSCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSD
YDGIGNRERPGFGRFERSGHSRWCDKSVEDDWSKPLPPSERLEQELFSGGNTGINFEK
YDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDL
MACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTREL
AVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKI
GLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLAR
DFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKK
GADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNV
RHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP
SWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGG
GYGNSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN"
BASE COUNT 796 a 509 c 678 g 730 t
ORIGIN
1 agaggggtct ggagttccta ggtgaacccc agcagcctaa ccctgtcaag tctgtcgagc
61 ctctggctgg tcacacgtgc tgcggaatcc actcagcttt cctcaggtgc agtcaggtcc
121 atcctgcaga gggaccttct gcggacctgt tctttcacct ccctaacctg aagattgtat
181 tcaaaccacc gtggatcgct cacgtaaaat ggtcactgcg cctaacacct gggatcccgt
241 aacccttatc tatcttggct tcagagagtt ttttgactag ttccaacttt gctgaagctt
301 gtcaaaggga tgagtcatgt ggtggtgaaa aatgaccctg aactggacca gcagcttgct
361 aatctggacc tgaactctga aaaacagagt ggaggagcaa gtacagcgag caaagggcgc
421 tatatacctc ctcacttaag gaacagagaa gcatctaaag gattccatga taaagacagt
481 tcaggttgga gttgcagcaa agataaggat gcatatagca gttttgggtc tcgagattct
541 agaggaaagc ctggttattt cagtgaacgt ggaagtggat caaggggaag atttgatgat
601 cgtggacgga gtgactatga tggtattggc aatcgtgaaa gacctggctt tggcagattt
661 gaacggagtg gacatagtcg ttggtgtgac aagtcagttg aagatgattg gtcaaaacca
721 cttccaccaa gtgaacgctt ggagcaagaa ctgttttctg gaggaaacac ggggattaac
781 tttgagaaat atgatgatat accagtagag gcaaccggca gtaactgtcc tccacatatt
841 gagaatttta gcgatattga catgggagaa attatcatgg ggaacattga acttactcgc
901 tatactcgtc ctactccagt gcaaaaacat gccattccta ttattaaggg aaaaagagac
961 ttaatggctt gtgcccaaac aggatctggg aaaactgcag catttctttt acccatactg
1021 agtcagatat atacagatgg tccaggagaa gctttgaagg ctgtgaagga aaatggaagg
1081 tatgggcgcc gcaaacaata tccaatatcc ttggttttag ccccaacaag agaattggct
1141 gtacagatct atgaggaagc cagaaaattt tcctaccgat ctagagttcg tccttgtgta
1201 gtttatggtg gtgctgatat tggtcagcag attcgggact tagaacgtgg atgccacttg
1261 ttagtagcca ctccaggacg tctagtggat atgatggaaa gaggaaagat tggattagac
1321 ttctgcaagt acttagtgtt ggatgaagct gataggatgc tggatatggg atttgaacct
1381 cagatacgtc gtatagttga acaagatact atgccaccaa agggcgttcg tcacaccatg
1441 atgtttagtg ctacttttcc taaggaaata cagatgcttg ctcgtgactt tttggatgaa
1501 tatatctttt tggctgtagg cagagtaggc tctacctctg agaacatcac acagaaagta
1561 gtttgggtgg aagacttaga taaacggtca tttctactgg acattttagg tgcaacaggg
1621 agtgattcac ttactttagt gtttgtggag accaaaaagg gagcagattc cctggaggat
1681 ttcttatacc atgaaggata tgcttgtact agtattcatg gagaccggtc acagagagat
1741 cgagaggagg cccttcacca gtttcgctca ggaaaaagcc caattctagt ggctacagct
1801 gtggcagcac gaggactaga catttcaaat gtgagacatg ttatcaattt tgatttgcca
1861 agtgatattg aagaatatgt gcatcgtatt ggccgtacag gacgtgtagg aaacctgggc
1921 cttgccacct cattctttaa tgaaaaaaat atgaatatta caaaggattt gttggatctt
1981 cttgtagaag ctaaacaaga agtgccttct tggttggaaa atatggctta tgaacaccac
2041 tacaagggtg gcagtcgtgg acgatctaaa agtaatagat tcagtggagg atttggtgcc
2101 agagactatc gacaaagtag tggttccagc agttctggct ttggtgctag tcgcggaagc
2161 agcagccgca gtggtggagg tggttacggc aacagcagag gatttggtgg aggtggctat
2221 ggaggcttct acaatagtga tggatatgga ggaaattata actcccaggg ggttgactgg
2281 tggggcaact gaatctgctt tgcagcaaag tcacccttac aaagaagcta atatggaaac
2341 cacatgtaac ttagccagac tatattgtgt agcttcaaga acttgcagta cattaccagc
2401 tgtgattctc ctgataattc aagggagctc aaagtcacaa gaagaaaaat gaaaggaaaa
2461 aacagcagcc ctattcagaa attggtttga agatgtaatt gctctagttt ggattaaact
2521 cttcccctcc tgctttagtg ccaccccaaa ctgcatttat aattttgtga ctgaggatcg
2581 tttgtttgtt aacgtactgt gactttaact ttagacaact tactactttg atgtcctgtt
2641 ggctcagtaa tgctcacgat accaattgtt ttgacaaaat aaatttacta aacttggaaa
2701 aaaaaaaaaa aaa
//