LOCUS BC034809 3054 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 109, member A, mRNA
(cDNA clone MGC:34643 IMAGE:4943538), complete cds.
ACCESSION BC034809
VERSION BC034809.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3054)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3054)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24432055.
FEATURES Location/Qualifiers
source 1..3054
/db_xref="H-InvDB:HIT000051243"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34643 IMAGE:4943538"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3054
/gene="FAM109A"
/gene_synonym="FLJ32356"
/db_xref="GeneID:144717"
/db_xref="HGNC:HGNC:26509"
CDS 293..1042
/gene="FAM109A"
/gene_synonym="FLJ32356"
/codon_start=1
/product="family with sequence similarity 109, member A"
/protein_id="AAH34809.1"
/db_xref="GeneID:144717"
/db_xref="HGNC:HGNC:26509"
/translation="MKLNERSLAFYATCDAPVDNAGFLYKKGGRHAAYHRRWFVLRGN
MLFYFEDAASREPVGVIILEGCTVELVEAAEEFAFAVRFAGTRARTYVLAAESQDAME
GWVKALSRASFDYLRLVVRELEQQLAAVRGGGGMALPQPQPQSLPLPPSLPSALAPVP
SLPSAPAPVPALPLPRRPSALPPKENGCAVWSTEATFRPGPEPPPPPPRRRASAPHGP
LDMAPFARLHECYGQEIRALRGQWLSSRVQP"
BASE COUNT 504 a 968 c 995 g 587 t
ORIGIN
1 caaagcgctg ccgccgccgt cgccgccacc gggccagtcc cgaaccatgg ccgggccacc
61 ccgcaacctc gcgcctcccg tcccgtcgcc gccctaggcc tgcgctgcga gatgcagaaa
121 cagaggccca gagagatgaa tagcctgcct ggggtccccc agcccagatg ctgcagagct
181 gacatttgaa tccagagaag agcgagctga ggctggagct gagcagaggg cagggaggca
241 agtggtggcc tgagaggccc caggctcccc tccaggcccc gcgattgcca ccatgaagct
301 gaacgagcgc agcctggcct tctacgccac ctgtgacgcc ccggtggaca atgcaggctt
361 cctgtacaag aagggtgggc ggcacgcggc ctaccaccgg cgctggttcg tgctgcgcgg
421 gaacatgctc ttctacttcg aggacgctgc cagccgtgag cccgtgggcg tcatcatcct
481 ggagggctgc actgtggagc tggtggaggc cgccgaggag ttcgccttcg ctgtgcgctt
541 tgcggggacc cgggcgcgca cctacgtgct ggccgctgag agtcaggatg ccatggaggg
601 ctgggtcaag gccctgtcgc gtgccagctt cgactacctg cggctggtgg tgcgcgagct
661 ggagcagcag ctggcggctg tacgtggcgg gggtggcatg gccctgcccc agccccagcc
721 ccagtccctg cccttgcccc cgtccctgcc ctctgccctg gccccagtcc catccctgcc
781 ttctgcccca gccccggtcc cagccctgcc cctgccccgc cggcccagtg ccctcccgcc
841 caaggagaat ggctgcgctg tctggagcac tgaggccacc ttcaggcctg gacccgagcc
901 ccctccacca ccgcctcgcc gccgggcctc ggcaccccac gggcccctgg acatggcccc
961 cttcgcccgg ctgcacgagt gctatggcca ggagatccgg gccctgcgtg gccagtggct
1021 cagcagccgg gtccagccct gaggccacca gggcgcctgt tttaggggga cacaagctct
1081 atgccctctg ggacaggccg ggtcctggag agactggggg agcagatcct gagggaaatc
1141 atgggcaagg ctggccccca ggccctgagt ggcctggttt tgggggatgc aggctctgag
1201 aaggtgctgg attctgagtg ggcctttagg accatgtgac ccagaaggcc tacccttgag
1261 gggaatgtca cgtgcaacac taaggagaat ccagggcctg agggggaggt ttcctgagaa
1321 ctccggcccc aggctggcct gagctgccgg gcagaggcct gtgctggcaa caggcattgc
1381 cgggcctgca gctcagaggg tcactgggac tgagggcgat ctgtggcctg aaaagcaaat
1441 gcacagttag tgcagctcct gaccaggcct tcagggtgga cagagggagg atcggtcatg
1501 gcagccacac ctgggcctgg ccttgctccg ggacctgcca gaggagctgg cctggctctg
1561 tgcctgcctg cctccaggag caggacggtg gctgggaggg tagtgactgg ggacacaggt
1621 gcaggtgtta gtgcaggacc ggaagggtga ggtggcctgg tcctcggggc tcctggcctg
1681 ggctggctga ggcaggactc tgccaaaagt cccctgccag gcctcatggt ggtgctcctg
1741 gtggcagtgg ctctctggcc gcgggccctg tctgtgtctc cgtggtggct ctcacagggc
1801 tctccagaca ctccttgact gcatccttca gtcttggccc ctaggcctgg ggccccttgg
1861 gagcttgcct gacctccctt cctgggctgg gtagccatgg cccgaggtga ccttctagca
1921 ggttccccca gggaggggag gccaccagct gactcaccgc ctaggaaggc ccaggtgctg
1981 acctagtggc ggagaaaaag ccgcacaccg agtgtggctt ccagagcccc tcttcagctc
2041 caggcagccc cctctaacat gtcccctcct gagctcagcc cccaccccca tactcctggt
2101 ggggaccagg tcttgcttgg cttcggggct gaccgccggt cccctttctt ctcaccacag
2161 tgcccatttt tcatccaggg agaacctcgg ggctgggaca cctcctggcc ctcaccctgg
2221 gtcatgttta cagtcctcag tgccccacac cggtggcccc ctgaggacac ctccaccctg
2281 accttgattt tcccaaacgc tgcctcttgg tgacagactc agcccaaaac cccttccttc
2341 tgtctctgga gacccttgag cttggggaaa tatggagggg tgtgtgtctg caatcaaggc
2401 ctctgcagct cacggctggc ccggtgggct gggacttccg tctgaatttt aaatacttag
2461 ggttcatttt tttttctctg gcaacaaagc ttgatgtttt cactgcttta gtttcctgtt
2521 tgctggtggg aggggatacg gtctgtgact ctggacttgc tctgggggaa cagttgtcac
2581 tgcccccggg gagaggggca gcttgggctg gagaagcaca gccagagaca gagcccctcg
2641 agagggatcc ttggctgctt cattgtcttc cccccagcaa gccctgctct ccacaggcac
2701 ctctggggtc ttggtatggt ccccgctcac ctccttccag agtcctgagt ggtgtgggtg
2761 tgggtggcac aggatctggg gcatgggagg ggttcagagc ttcccagagc cccgtgtcct
2821 ggcagactca gctggtgggc tggggtgtta accccagtcc tggcgtaggt ttacagactc
2881 tcaaggtacg ttggccctgg tctcctggga gagaggggtg agggatgtcc cctaccaaag
2941 cacaaggtgg gatcaggctg cctcctgggt tgggtgtcgg gggagctgtc cggcagcctg
3001 gcagggagat gcaagggcta aagtaaaatt ttgtcaagta aaaaaaaaaa aaaa
//