LOCUS BC034782 1732 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens F-box protein 39, mRNA (cDNA clone MGC:35179
IMAGE:5170425), complete cds.
ACCESSION BC034782
VERSION BC034782.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1732)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1732)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: d Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23397499.
FEATURES Location/Qualifiers
source 1..1732
/db_xref="H-InvDB:HIT000051239"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35179 IMAGE:5170425"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1732
/gene="FBXO39"
/gene_synonym="Fbx39"
/gene_synonym="MGC35179"
/db_xref="GeneID:162517"
/db_xref="HGNC:HGNC:28565"
/db_xref="MIM:609106"
CDS 101..1429
/gene="FBXO39"
/gene_synonym="Fbx39"
/gene_synonym="MGC35179"
/codon_start=1
/product="F-box protein 39"
/protein_id="AAH34782.1"
/db_xref="GeneID:162517"
/db_xref="HGNC:HGNC:28565"
/db_xref="MIM:609106"
/translation="MDEESELIQPQDQSCWAFLPDLCLCRVFWWLGDRDRSRAALVCR
KWNQMMYSAELWRYRTITFSGRPSRVHASEVESAVWYVKKFGRYLEHLEVKFMNPYNA
VLTKKFQVTMRGLLSCLSKSNNRLKSLSIQYLELDRLVWRNSIRSSFISSLSFFLKKM
GKRLDYLNLKGARLTVEQGCQILDSLSYMRNENVISELNIEDYFSHHLAVYNSPQFKK
TMSTFHNLVSLNLNYNCISDELLENLCENASTLRTINIKCHVHDPHGQVIWGMSWAKL
ARQATNLKVNFFFERIMKYERLARILLQEIPIRSISLRSCYFSDPDCSMRPTLIDLLP
TFRHTLQKLTCEFNNNHESLDEELHLLIISCRKLFYFKIWAFLDVSFVERILKSQKER
QCALRVFKARIYTNRYETNEEDKTLQEIYRKYRKLIESELSYFVIVYSVM"
BASE COUNT 509 a 424 c 387 g 412 t
ORIGIN
1 cagctgcgcg ggcggagcag aaagcaagtg attgctttcc tttcctcatt tttggaagcc
61 ctgcctaaca cacagctgca ctgtacatcc cagttcctgg atggacgaag aaagtgaact
121 gatccagccc caagaccaga gctgctgggc ctttctgccc gatttgtgtc tgtgccgtgt
181 tttctggtgg ctaggagaca gggacaggtc cagggctgct cttgtctgca gaaagtggaa
241 ccagatgatg tattctgctg agctctggcg gtacagaacc atcaccttca gcgggagacc
301 ttccagggta catgcatctg aagttgagtc agctgtttgg tatgttaaga agtttggtcg
361 ttatctggag cacctggagg tcaaattcat gaatccttac aatgctgtct tgaccaagaa
421 gttccaggtc accatgcggg gcctcctgtc ttgtctgagt aagagcaaca accgtctgaa
481 atctctttcc atccaatacc tggagctgga ccgcctggta tggaggaaca gcatcaggag
541 ctcattcatc agcagcttga gcttcttctt aaagaagatg ggcaaacgcc tggattatct
601 caacctaaaa ggggccaggc tgaccgtgga gcaaggctgc caaattctcg actccctcag
661 ctacatgagg aatgagaatg tgatctcaga gctcaacatc gaggactatt tcagccatca
721 ccttgctgtc tacaacagcc cccagttcaa aaagaccatg tccacattcc acaatcttgt
781 gtccctgaac ctcaactaca actgtatctc cgacgagctg cttgagaact tgtgtgagaa
841 tgccagcacc ctccggacca tcaacatcaa atgccacgtt catgaccccc acggacaggt
901 catctggggt atgtcctggg ccaagctggc caggcaggcc accaatctga aggtgaactt
961 cttctttgaa cggatcatga agtacgaacg cttggcccga atcctcttgc aggagatccc
1021 gatcaggagc atcagtctga gaagctgcta tttcagtgac ccagactgtt caatgagacc
1081 cactctgata gatctcctgc ccaccttccg gcacactctg cagaaattaa cttgtgaatt
1141 caacaacaac catgagtcac tcgacgagga gctgcacctc ctcattatat cctgcaggaa
1201 gttgttttac ttcaaaatct gggctttcct tgatgttagt tttgtggagc ggatcctgaa
1261 gagtcagaaa gaacggcagt gtgccctgcg tgtattcaag gcgagaattt atacaaacag
1321 atatgagacg aatgaagagg acaagaccct gcaggaaatt tacaggaagt acagaaagct
1381 gatcgaatca gagcttagct attttgtcat cgtttactct gtgatgtaat gagcactcta
1441 cagatgaaga aagctgggag cactttgaac ttgaaaatca tttctcttag aactacactt
1501 gggcactgcc agcccttttg ctcctctctc tccccccgct tttttttctt ttgtcagctc
1561 catgacaaca tgaccagctc agcaaaggct gagactgccc atgacctgaa ggctccaggt
1621 ggctttaaag cgctatgttt accaactaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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