LOCUS BC034721 2250 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 4, mRNA
(cDNA clone MGC:17027 IMAGE:4340658), complete cds.
ACCESSION BC034721
VERSION BC034721.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2250)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2250)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24431959.
FEATURES Location/Qualifiers
source 1..2250
/db_xref="H-InvDB:HIT000051216"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17027 IMAGE:4340658"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2250
/gene="DNAJB4"
/gene_synonym="DjB4"
/gene_synonym="DNAJW"
/gene_synonym="HLJ1"
/db_xref="GeneID:11080"
/db_xref="HGNC:HGNC:14886"
CDS 160..1173
/gene="DNAJB4"
/gene_synonym="DjB4"
/gene_synonym="DNAJW"
/gene_synonym="HLJ1"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily B, member 4"
/protein_id="AAH34721.1"
/db_xref="GeneID:11080"
/db_xref="HGNC:HGNC:14886"
/translation="MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEK
FKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFF
GGSNPFEIFFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDPPV
IHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPR
EGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN
IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHL
PAS"
BASE COUNT 762 a 327 c 430 g 731 t
ORIGIN
1 gagacgctgt ctgcttgctg ccttaagaca gctagctgaa ttgctgatta acttttaaaa
61 tacccagctt ggtttatttt tcttagaatc tgttgctaag actggggacg ctgttttctt
121 ttacaaaggg aaatctaagt taatttcaag gcattcgaaa tggggaaaga ctattattgc
181 attttgggaa ttgagaaagg agcttcagat gaagatatta aaaaggctta ccgaaaacaa
241 gccctcaaat ttcatccgga caagaacaaa tctcctcagg cagaggaaaa atttaaagag
301 gtcgcagaag cttatgaagt attgagtgat cctaaaaaga gagaaatata tgatcagttt
361 ggggaggaag ggttgaaagg aggagcagga ggtactgatg gacaaggagg taccttccgg
421 tacacctttc atggcgatcc tcatgctaca tttgctgcat ttttcggagg gtccaacccc
481 tttgaaattt tctttggaag acgaatgggt ggtggtagag attctgaaga aatggaaata
541 gatggtgatc cttttagtgc ctttggtttc agcatgaatg gatatccaag agacaggaat
601 tctgtggggc catcccgcct caaacaagat cctccagtta ttcatgaact tagagtatca
661 cttgaagaga tatatagtgg ttgtaccaaa cggatgaaga tttctcgaaa aaggctaaac
721 gctgatggaa ggagttacag atctgaggac aaaattctta ccattgagat taaaaaaggg
781 tggaaagaag gcaccaaaat tacttttcca agagaaggag atgaaacacc aaatagtatt
841 ccagcagaca ttgtttttat cattaaagac aaagatcatc caaaatttaa aagggatgga
901 tcaaatataa tttatactgc taaaattagt ttacgagagg cattgtgtgg ctgctcaatt
961 aatgtaccaa cactggatgg aagaaacata cctatgtcag taaatgatat tgtgaaaccc
1021 ggaatgagga gaagaattat tggatatggg ctgccatttc caaaaaatcc tgaccaacgt
1081 ggtgaccttc taatagaatt tgaggtgtcc ttcccagata ctatatcttc ttcatccaaa
1141 gaagtactta ggaaacatct tcctgcctca tagaatgaag aactttgtta cacatatttt
1201 gataaggcac tgaaaatata aaaggactgg tagtttactg atgtagatgt gaattctgta
1261 taaagatgtg taaattcttt tgagggttca ttaaattgca tgaatagaga cgggtcaaat
1321 aaataggcaa aagggatttt tacagttaga gataaaagag aaaaccattc actgtatttt
1381 atttcatttc tcctgattca gatattttta gtaatttgct tatatgtaaa agttgttttt
1441 gtggagtcag tggatatatt tctaatgaag tgctagacta tccaattact taatttctta
1501 tacctttaga taatcagtat gaaaagttcc catttataat ggaaatgaaa attcttaact
1561 aaactataca tgtaatatgt atttctagaa gagaataaaa acccaagtca gttattagat
1621 ttaaatcacc ttctgaaatg ctgctatagg gctggtatct gtaaaagaat atcctgatgc
1681 atctgtttca ccattttgat ttttaaagta tgctgtagca tttcttaata acatcgttgt
1741 gatgttctta aggcagatct ttcttcataa aaaggaaagt aatggcaatt tctctcctgt
1801 ggaaatccca attgcttgaa ttactgatat tttagaatag actttttaaa atgccatatg
1861 taattttatg caagttgact atatatcttg tacttaataa attataggct cattttgttc
1921 tctgctagtt taaagtaatt cgtttaataa tagatgtgtt tttagaggaa atgctgttac
1981 ttggaattaa ttttccagtt atacagtctt ctataactta ctaataatat tctatatgta
2041 ctttatgtaa tttccctaaa aagaatgaac taccactaca ctatggtgtt aaaccaaaat
2101 atagggaaaa taaacactaa ctgctgctta tggataatgt tgcaactact tgttatgcat
2161 ataaatattt tactttttca catgtataga ttgcatttct taggtgtttt aattttttaa
2221 atatatttat gttttaaaaa aaaaaaaaaa
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