LOCUS BC034703 2191 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens sphingosine-1-phosphate receptor 5, mRNA (cDNA clone
MGC:21772 IMAGE:4754850), complete cds.
ACCESSION BC034703
VERSION BC034703.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2191)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2191)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: p Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46198302.
FEATURES Location/Qualifiers
source 1..2191
/db_xref="H-InvDB:HIT000051209"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21772 IMAGE:4754850"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2191
/gene="S1PR5"
/gene_synonym="Edg-8"
/gene_synonym="S1P5"
/gene_synonym="SPPR-1"
/gene_synonym="SPPR-2"
/db_xref="GeneID:53637"
/db_xref="HGNC:HGNC:14299"
/db_xref="MIM:605146"
CDS 58..1254
/gene="S1PR5"
/gene_synonym="Edg-8"
/gene_synonym="S1P5"
/gene_synonym="SPPR-1"
/gene_synonym="SPPR-2"
/codon_start=1
/product="sphingosine-1-phosphate receptor 5"
/protein_id="AAH34703.1"
/db_xref="GeneID:53637"
/db_xref="HGNC:HGNC:14299"
/db_xref="MIM:605146"
/translation="MESGLLRPAPVSEVIVLHYNYTGKLRGARYQPGAGLRADAVVCL
AVCAFIVLENLAVLLVLGRHPRFHAPMFLLLGSLTLSDLLAGAAYAANILLSGPLTLK
LSPALWFAREGGVFVALTASVLSLLAIALERSLTMARRGPAPVSSRGRTLAMAAAAWG
VSLLLGLLPALGWNCLGRLDACSTVLPLYAKAYVLFCVLAFVGILAAICALYARIYCQ
VRANARRLPARPGTAGTTSTRARRKPRSLALLRTLSVVLLAFVACWGPLFLLLLLDVA
CPARTCPVLLQADPFLGLAMANSLLNPIIYTLTNRDLRHALLRLVCCGRHSCGRDPSG
SQQSASAAEASGGLRRCLPPGLDGSFSGSERSSPQRDGLDTSGSTGSPGAPTAARTLV
SEPAAD"
BASE COUNT 474 a 629 c 670 g 418 t
ORIGIN
1 ggcagcgcga ctgcgggtgg cgcacgacca gggcgcagac cttggggcgc gcggcccatg
61 gagtcggggc tgctgcggcc ggcgccggtg agcgaggtca tcgtcctgca ttacaactac
121 accggcaagc tccgcggtgc gcgctaccag ccgggtgccg gcctgcgcgc cgacgccgtg
181 gtgtgcctgg cggtgtgcgc cttcatcgtg ctagagaatc tagccgtgtt gttggtgctc
241 ggacgccacc cgcgcttcca cgctcccatg ttcctgctcc tgggcagcct cacgttgtcg
301 gatctgctgg caggcgccgc ctacgccgcc aacatcctac tgtcggggcc gctcacgctg
361 aaactgtccc ccgcgctctg gttcgcacgg gagggaggcg tcttcgtggc actcactgcg
421 tccgtgctga gcctcctggc catcgcgctg gagcgcagcc tcaccatggc gcgcaggggg
481 cccgcgcccg tctccagtcg ggggcgcacg ctggcgatgg cagccgcggc ctggggcgtg
541 tcgctgctcc tcgggctcct gccagcgctg ggctggaatt gcctgggtcg cctggacgct
601 tgctccactg tcttgccgct ctacgccaag gcctacgtgc tcttctgcgt gctcgccttc
661 gtgggcatcc tggccgcgat ctgtgcactc tacgcgcgca tctactgcca ggtacgcgcc
721 aacgcgcggc gcctgccggc acggcccggg actgcgggga ccacctcgac ccgggcgcgt
781 cgcaagccgc gctcgctggc cttgctgcgc acgctcagcg tggtgctcct ggcctttgtg
841 gcatgttggg gccccctctt cctgctgctg ttgctcgacg tggcgtgccc ggcgcgcacc
901 tgtcctgtac tcctgcaggc cgatcccttc ctgggactgg ccatggccaa ctcacttctg
961 aaccccatca tctacacgct caccaaccgc gacctgcgcc acgcgctcct gcgcctggtc
1021 tgctgcggac gccactcctg cggcagagac ccgagtggct cccagcagtc ggcgagcgcg
1081 gctgaggctt ccgggggcct gcgccgctgc ctgcccccgg gccttgatgg gagcttcagc
1141 ggctcggagc gctcatcgcc ccagcgcgac gggctggaca ccagcggctc cacaggcagc
1201 cccggtgcac ccacagccgc ccggactctg gtatcagaac cggctgcaga ctgacaccct
1261 cggcccacga ctgtcttccc aagttttaca gacttgttct ttttacataa aggaatttgt
1321 aggaaatgca gccaaaggtg cagtcggaaa agatgcaggg gaaatgtatt tatgcagcga
1381 caccccacaa tgtgaacaaa cagacaaaaa atctgtgccc tcgtggaatt gacgttctgc
1441 ttgggaacac agaaaagaac tcggtgatga aataatggag atgattccag tgacaaacga
1501 cagagatggt gatggtggtc agggaagacc tctctgcaga ggtagtgact tgtgatgtga
1561 gctgagacct ctgtcctggg aagaccaaaa gaaaagcatt tcaggatgag ggaatggcat
1621 gcgcaaaggc cctgaggctg aaatgtgccc atgtgttcta agaaatgcag cgatgctggt
1681 gtgcctggag cagggacgga gggggagaat gggaggagac aaggagctga agtagttccc
1741 gaaggacctt gtgggtgata tagaggactt cgcttttgct ctgagtgagg tgggagccat
1801 agaagcttct aagcagaaga gggacttgcc ctaattcagg tgatcacagg tgtcttgtgg
1861 cctccatggg aggttgaaaa ccagagaagg tgaagggggg ctgcactgag ccacaggaac
1921 aatgatggag attccagcta agcccagacc ccgtggattc tagatagatt ttagaggcag
1981 cagacagaat tactgaggaa ttgagtgtaa gagtggaata aagttatcaa ggacaatgcc
2041 aagggtgggg cacccccaaa tttgactctg ggagactcag ccaaatccta tctggtaata
2101 aaatttcttt tttattttta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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