LOCUS BC034672 1895 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 17 open reading frame 78, mRNA (cDNA clone
MGC:34759 IMAGE:5184947), complete cds.
ACCESSION BC034672
VERSION BC034672.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1895)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1895)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: e Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45580703.
FEATURES Location/Qualifiers
source 1..1895
/db_xref="H-InvDB:HIT000051195"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34759 IMAGE:5184947"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1895
/gene="C17orf78"
/gene_synonym="FLJ39647"
/gene_synonym="MGC34759"
/db_xref="GeneID:284099"
/db_xref="HGNC:HGNC:26831"
CDS 51..878
/gene="C17orf78"
/gene_synonym="FLJ39647"
/gene_synonym="MGC34759"
/codon_start=1
/product="chromosome 17 open reading frame 78"
/protein_id="AAH34672.1"
/db_xref="GeneID:284099"
/db_xref="HGNC:HGNC:26831"
/translation="MDTILVFSLIIASYDANKKDLRDSSCRLEQLPGIFPKDVRSIRE
LQMQETHTETKRTTFIQNRTIATLQCLGSDSKVKVNLVYLERRPKVKHILKNLRIIAA
PRRNSSASSSCHLIPTSKFQTGSLLKGKAFLPGISQCKVLGASSETFPTSAPSITPGN
KEGEKTTSTDTDENLEKRQKWSIVVKILIAVTLLLSGVAIIVFVIFEVPCPYQCLGAR
KLCQCQWLWRWQKKGGQPPGTAESKPDSQPQKVGQDAANSSNPKKAAEITVIHQTYF"
BASE COUNT 601 a 433 c 370 g 491 t
ORIGIN
1 gtgacagatg agcagtggtc tgtctgcaat gagcatgtgc tcaagctaac atggatacca
61 tcttggtctt cagcctaatc attgcatcct atgatgccaa caagaaagac ctcagagata
121 gcagttgccg actggaacag ctgcctggga tcttcccaaa agacgtgaga agcatcagag
181 aattgcaaat gcaagaaact cacacagaaa ccaaaaggac aacattcatt caaaaccgga
241 ctatagctac cctgcagtgc cttggctctg acagcaaagt aaaagtcaac cttgtatatt
301 tggagagaag gccaaaggtc aagcatattt tgaagaacct gagaatcatt gctgctcccc
361 gcagaaacag ctctgcctcc tcaagctgtc acctaatccc cacatccaag tttcagactg
421 gatctcttct aaaaggcaaa gcttttttac cagggatctc acaatgtaaa gtcctggggg
481 cttcatcaga gacttttccc accagtgccc cttctataac tcctgggaat aaagaaggag
541 agaaaactac aagtaccgac acagatgaga acctagagaa gagacagaaa tggagtattg
601 tggtcaaaat tctgattgct gtcaccctgt tgctcagtgg agttgccatt atagtatttg
661 taatttttga agtcccatgt ccttatcaat gcctaggagc caggaagctg tgccaatgcc
721 agtggttgtg gagatggcaa aagaagggag gccagccacc tgggacagct gaatccaagc
781 ctgactctca gccccagaag gttggacaag atgctgccaa ttcatcaaac ccaaagaaag
841 ctgcagagat cactgttatc caccagacat acttctgaaa agttctgctc tatctcaaag
901 actgaatgat actacacagt cctctcccta ttaatatggg cacattcttg ccaatttcac
961 acttgtatct tcagcaggga cattacaatc aaacaccaat tcctggttaa tgaagggaga
1021 gtgtgggctt agcagagtta ccctcatgcc cctatctgag ccacaacctt ctgtaattca
1081 cttcatacat ccatctaaat ggataccttt ccatcccctc aaacgagaac aaaaagtatt
1141 ccctgcaagc actatgaatg gaccttacta ctctctttga cagaagactc aaacacagcc
1201 tctaagaaac aaggcagctg ttagtgtgac atagcttcca gctcctctgt tatcttcaca
1261 gctgacttca cactcactgg ccctcaatag cttagagtgg gactcctgat ctccctggtt
1321 gacgtttata aggttttgta atttagcttc tggtactaca tgtatctatc cacacactgc
1381 tgaagggaac ttgaccctac gcattccaaa agccttcctc ataagttatc cccaaggggt
1441 tcagggacta cagaccatta gtacccaagt gaagtcttct gacgatccag aattcctaag
1501 gtggctctga tattatatca tactttaata gagagttgca taccttttgg acaaagattc
1561 cagagcaaaa taattatgat aatgctgttt ctcacaggag aatagctatg agtcaaatct
1621 aacctgctta aataagagtt tggtgagaaa gtgaaaccac ctgatcttga atcaatgttg
1681 aggtgaaaaa ggaaatgtca ggagggataa gacagggtga ggccctgctt cttttcctaa
1741 gagtctgaaa ccattccatt tcattttggt gaaatgtgtc tgtttctaag aaattctgtt
1801 ttcttagttc tctggttaaa aaaaaaaata cataaactgt atccttcttt ctttcacttc
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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