LOCUS BC034532 3392 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens calcium channel, voltage-dependent, gamma subunit 4,
mRNA (cDNA clone MGC:24983 IMAGE:4939335), complete cds.
ACCESSION BC034532
VERSION BC034532.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3392)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3392)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: o Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22027547.
FEATURES Location/Qualifiers
source 1..3392
/db_xref="H-InvDB:HIT000051180"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24983 IMAGE:4939335"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3392
/gene="CACNG4"
/gene_synonym="MGC11138"
/gene_synonym="MGC24983"
/db_xref="GeneID:27092"
/db_xref="HGNC:HGNC:1408"
/db_xref="MIM:606404"
CDS 3..986
/gene="CACNG4"
/gene_synonym="MGC11138"
/gene_synonym="MGC24983"
/codon_start=1
/product="calcium channel, voltage-dependent, gamma
subunit 4"
/protein_id="AAH34532.1"
/db_xref="GeneID:27092"
/db_xref="HGNC:HGNC:1408"
/db_xref="MIM:606404"
/translation="MVRCDRGLQMLLTTAGAFAAFSLMAIAIGTDYWLYSSAHICNGT
NLTMDDGPPPRRARGDLTHSGLWRVCCIEGIYKGHCFRINHFPEDNDYDHDSSEYLLR
IVRASSVFPILSTILLLLGGLCIGAGRIYSRKNNIVLSAGILFVAAGLSNIIGIIVYI
SSNTGDPSDKRDEDKKNHYNYGWSFYFGALSFIVAETVGVLAVNIYIEKNKELRFKTK
REFLKASSSSPYARMPSYRYRRRRSRSSSRSTEASPSRDVSPMGLKITGAIPMGELSM
YTLSREPLKVTTAASYSPDQEASFLQVHDFFQQDLKEGFHVSMLNRRTTPV"
BASE COUNT 713 a 1049 c 878 g 752 t
ORIGIN
1 ccatggtgcg atgcgaccgc gggctgcaga tgctgctgac cacggccgga gccttcgccg
61 ccttctcgct catggccatc gccatcggca ccgactactg gctgtactcc agcgcgcaca
121 tctgcaacgg caccaacctg accatggacg acgggccccc gccccgccgc gcccgcggcg
181 acctcaccca ctctggtctg tggcgggtgt gctgcatcga agggatctat aaagggcact
241 gcttccggat caatcacttc ccagaggaca atgactacga ccacgacagc tcggagtacc
301 tcctccgcat cgtgcgagcc tccagcgtct tccccatcct cagcaccatc ctgctcctgc
361 tgggtggcct gtgcatcggt gctggcagga tctacagccg caagaacaac atcgtcctca
421 gtgccggcat cctcttcgtg gctgcaggcc tcagtaacat catcggtatc atcgtctaca
481 tttccagcaa cacaggtgac ccgagtgaca agcgggacga agacaaaaag aaccattaca
541 actacggctg gtctttttac tttggagctc tgtctttcat tgtggctgag accgtgggcg
601 tcctggctgt aaacatttac attgagaaaa ataaagagtt gaggtttaag accaaacggg
661 aattccttaa ggcgtcttcc tcttctcctt atgccaggat gccgagctac aggtaccggc
721 gacggcgctc gaggtccagc tcaaggtcca ctgaggcctc gccctccagg gacgtgtcgc
781 ccatgggcct gaagatcaca ggggccatcc ccatggggga gctgtccatg tacacgctgt
841 ccagggagcc cctcaaggtg accaccgcag ccagctacag ccccgaccag gaggccagct
901 tcctgcaggt gcatgacttt ttccagcagg acctgaagga aggtttccac gtcagcatgc
961 tgaaccgacg gacgacccct gtgtgagccg cctgcccttt ctctccgctc cagcctctcc
1021 ccagaacggc tctttttgtc acacaggatg gcatgtgatc ctcaagacga cgaacaatga
1081 actaaagcca aatgcagccc tccctggcct ccagaggtgg cgtgggctgg ctttgcacga
1141 aggttgtgct gggagaccgg acccggggct gcagaagaag ctgaaggctg actttgtccc
1201 ctccccgaaa aagggtgttt tgatgcctca gggtctctga aatctcccgg gaagccccag
1261 agctttcctg aggctgcctg gccttgatca acttgggaag acaaaattga gccattatct
1321 cctcttggaa acgaatcttg ccagaaaaac gggatttcag ggccttccct ccctgcctgg
1381 gtgtcgggcc accagaaggc tctgccggac gccaagaaga cggtctctgg gctcttgtca
1441 gctgcttttg aacctgaggt tcctgcgtcg ttgagccaga aatcagacca ccgaagctca
1501 ctcccttcct ctccatctct ccctctctcc aagactctgg cagtggccta tgatcctgaa
1561 gacagctctg cagccaactg gtgctttggc ctttgcgctg tcccggggcc agcttccctc
1621 gacctgggga ggccgtggcc tgtggaggag gcccaggtaa aggctggggg ctgttgctgg
1681 ctatcctctt tgcttctgga agtttctgcc tcactcagaa tgggcaggac agacccactg
1741 actggacttc agagtctgga gggttccatc ggtcagggga atggcggcca cgtgacctct
1801 tgccgtgccc cttgtcatag acccaaggag caactctgtc ccctgagcgt tgggggtccc
1861 gggggagagg tggacagaca cctccctcca actggcattt ggcaacagga gcctggactt
1921 ctgtgcaaga aagggagacc taagggtgaa cagtggccaa taaaaaccct agagaacaaa
1981 catccatttc ctaggtggtt acaaatcata acttcctgca aatcaacgcc aggagagcaa
2041 cttaccttca tttctttgtc ttaaaaagta gcagcaactg gccccacaac tcctgtcatt
2101 gtaagttatt ctgccaccac ctaacaggac ggagtggagt gagtttggat aaacggaccg
2161 agctgggctt ctcttcctcc ctacagaggg gagatctcag cactttgtcc ggagctgagg
2221 aagtggtttc tgtgttttac agtttttcca gccattcttt tcttccccct cctgaagcaa
2281 gcaaagagcg tggaggcgtg tgcaggcttg gaagaagaac tctccagaac atggaactta
2341 accctctttt gtataaaaca tgtgctttct aaagaaaaat tgtttcttat tttttgagac
2401 tccttgatcc accctggaac agtcgcctgt agtcctggta gctgttgtgc ttggaaataa
2461 cgagcgcatc cttgcctcag ctacctgctc acagcccatg ggtggactcg gccccctggg
2521 gttcagaccc aggtccgttc ggcctagtga tgatgtcatc gtccatccca tcttcctttg
2581 cccccaggaa aggacgcatc caccggtagc ggccccagct gactgtcgcc gtgtgctggg
2641 gatctgaaat gaggcctgcc agggcccctg tgtgctgtgc tccagagcct tcgctcccat
2701 cagggttggc atcatctgat ggcatgtcca agtgtgccca gcagcggatg ctgaagcacc
2761 agagctcaag gccttcacct gctctaggcc agccctgtca ccacctccac tgccatgacc
2821 aggccgaagg cagggaacgc cctccccagt cccgctgtcc agcaaggccc cgagactttt
2881 cttctgtgat ttccaaaagc aaggcagccg tgctgttcta gttcctctcc atccgccacc
2941 tcccctcccg ctgccccaga agtttctatc attccatgga gaaagctgtg ttccaatgaa
3001 tcctacctct tgcccagtcc caggcagagt aagcagggcc cacctaggga ccaagaaaga
3061 gtaggaagaa ggggacgagc cgggagcaaa accacctcag acacccgggc cttctcagcc
3121 ttctccccgc ggccagctgg gtctccgggg accctgggcc ctgggccgcc cattcctggc
3181 cctcccgctg catctcagac ctgacaccca acggggggat gtggtggcct gtgcccacct
3241 tctctccctc ctcccgaccc gccccctcgc ccccacccct gtgtgtttcg ccagttaagc
3301 acctgtgact ccagtaccta ctactggttt tgggttggtt gttctgtctt ttttttaatt
3361 aaataaaaac atttttaaaa aaaaaaaaaa aa
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