LOCUS BC034496 2024 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens spermatogenesis associated 16, mRNA (cDNA clone
MGC:26729 IMAGE:4825905), complete cds.
ACCESSION BC034496
VERSION BC034496.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2024)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2024)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034496.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15100157.
FEATURES Location/Qualifiers
source 1..2024
/db_xref="H-InvDB:HIT000051169"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26729 IMAGE:4825905"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2024
/gene="SPATA16"
/gene_synonym="NYD-SP12"
/db_xref="GeneID:83893"
/db_xref="HGNC:HGNC:29935"
/db_xref="MIM:609856"
CDS 87..1796
/gene="SPATA16"
/gene_synonym="NYD-SP12"
/codon_start=1
/product="spermatogenesis associated 16"
/protein_id="AAH34496.1"
/db_xref="GeneID:83893"
/db_xref="HGNC:HGNC:29935"
/db_xref="MIM:609856"
/translation="MDAGSSRSLENAVNRIYHDQLVPKINTSKKMSTLAHPPNILEMS
QEIKKNCGGKQVEITLERTKMTKGIKEKQSNDLEKAAFKRKAEGEGKPTRKKQAKITE
LDNQLITMPLPHIPLKNIMDVEMKLVYIDEMGVRYEFVESFMSTGSQPTCQAAEIVDP
LSVHNFSFLPQIDKWLQVALKDASSCYRQKKYALAAGQFRTALELCSKGAVLGEPFDA
PAEDIASVASFIETKLVTCYLRMRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLE
RYSEAARSAMIADYMFWLGGGREESISKLIKLYWQAMIEEAITRAESFSVMYTPFATK
IRADKIEKVKDAFTKTHPAYAEYMYTDLQALHMLPQTVDWSSFPPQQYLLTLGFKNKD
DGKFLEKISSRKLPIFTEHKTPFGLTREDTVRQMETMGKRILPILDFIRSTQLNGSFP
ASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQEAELLQSLMAD
AMDTLEGRRNNNERVWNMIQKVGQIEDFLYQLEDSFLKTKKLRTARRQKTKMKRLQTV
QQR"
BASE COUNT 691 a 409 c 462 g 462 t
ORIGIN
1 agatgctgtg gctgggagga gtccagagct tcgccctgtc cccgcggggc tgagccacaa
61 ctgcttagga gttttgggca ggatcgatgg atgcaggaag cagtaggagt ttggagaatg
121 cagtgaatag gatctatcat gatcagcttg ttccaaagat aaacacaagc aagaaaatgt
181 ccaccttagc gcacccacct aacatcctgg aaatgtcaca agagattaag aaaaactgtg
241 gaggtaaaca ggtagaaatc acacttgaaa gaacaaaaat gacaaagggc atcaaagaaa
301 aacaaagcaa tgatttagag aaagcagcct ttaaacggaa ggcagaaggt gaaggaaagc
361 caactagaaa gaaacaggca aagataacag aacttgacaa tcagttaatc accatgcctc
421 tgcctcacat ccccttaaag aacataatgg atgtggaaat gaagttggtc tacattgatg
481 aaatgggtgt tcgctatgag tttgtagagt ccttcatgtc tactgggagt cagccaacat
541 gccaagctgc tgaaatagta gaccctttga gtgtacataa tttcagcttt ctgcctcaga
601 ttgacaaatg gcttcaggta gccttaaagg atgccagctc ttgctataga caaaagaaat
661 acgccttggc agcaggacag ttcagaacag cacttgagct ttgcagcaaa ggagcagttc
721 tgggagaacc atttgatgca cctgctgaag atatagcaag cgtggcaagt ttcattgaga
781 caaagcttgt tacctgttat ctacggatga ggaaaccaga tcttgccctg aatcatgcac
841 acaggagcat tgttttaaac ccagcctatt tccggaatca tcttcgtcaa gcaacagtgt
901 ttagatgtct ggagaggtat tcagaggctg cccggagtgc catgattgct gactacatgt
961 tctggcttgg tggaggaagg gaagagagca taagcaagct catcaaactg tattggcagg
1021 ccatgattga ggaagccatc accagagctg aatctttctc ggttatgtac acaccatttg
1081 cgacaaaaat aagagctgat aaaatagaaa aagtaaaaga tgctttcaca aaaactcatc
1141 ctgcatatgc agagtatatg tacacagatc ttcaagcact ccacatgttg cctcagacag
1201 ttgactggtc atcttttcct ccccaacaat atctcttgac tcttgggttc aaaaacaaag
1261 atgatggaaa atttttggaa aaaatatcaa gcaggaagct gccgatattc acagagcata
1321 aaacaccttt cggtctgacc agagaagata cagtgaggca aatggagaca atggggaagc
1381 gaatcttgcc aatattggat tttattagaa gcacccaatt gaatgggagt tttcctgcat
1441 cctcaggtgt gatggagaag ttgcaatatg ccagcctcct cagccagctg cagagagtaa
1501 aggagcagtc ccaggtgatt aatcaagcaa tggcagagct agcaaccatt ccctacctac
1561 aggacatcag tcaacaggag gcagaattgc tgcagtcact aatggcagat gctatggaca
1621 cccttgaagg aagaagaaac aataatgaac gtgtgtggaa tatgatccaa aaggttggac
1681 aaattgaaga ttttctatac caattagagg acagtttctt aaaaactaaa aaactgagaa
1741 ctgctcgaag gcaaaaaaca aaaatgaagc gacttcaaac tgttcagcaa aggtagtcat
1801 tagggagcag gcactaccac taagatatcc cagaagaaga ggcaagggca tccactccaa
1861 tgcccaccta gtactgtgaa gctggataac aaaagcttgt caccaaaaga aagaggtggt
1921 attcccctca gttcatcttt accaaagaca ctctatgttt cattaatctc aactggcagc
1981 aataaatatt ctcagcaagt ttgacttgaa aaaaaaaaaa aaaa
//