LOCUS       BC034494                3718 bp    mRNA    linear   HUM 19-MAR-2009
DEFINITION  Homo sapiens synovial sarcoma translocation gene on chromosome
            18-like 1, mRNA (cDNA clone MGC:26711 IMAGE:4823298), complete cds.
ACCESSION   BC034494
VERSION     BC034494.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3718)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3718)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUL-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 25, 2003 this sequence version replaced BC034494.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 33 Row: f Column: 9
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 39777611
            The stop codon of the CDS annotated on this record is located > 55
            bases upstream of a splice junction, and therefore the mRNA is
            predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES             Location/Qualifiers
     source          1..3718
                     /db_xref="H-InvDB:HIT000051167"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:26711 IMAGE:4823298"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..3718
                     /gene="SS18L1"
                     /gene_synonym="CREST"
                     /gene_synonym="LP2261"
                     /db_xref="GeneID:26039"
                     /db_xref="HGNC:HGNC:15592"
                     /db_xref="MIM:606472"
     CDS             56..1246
                     /gene="SS18L1"
                     /gene_synonym="CREST"
                     /gene_synonym="LP2261"
                     /codon_start=1
                     /product="SS18L1 protein"
                     /protein_id="AAH34494.1"
                     /db_xref="GeneID:26039"
                     /db_xref="HGNC:HGNC:15592"
                     /db_xref="MIM:606472"
                     /translation="MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKT
                     AECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQ
                     GSLSDAISTGLPPSSLLQGQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQ
                     GVPMQGQGTIGNYVSRTNINMQSNPVSMIQQQAATSHYSSAQGGSQHYQGQSSIAMMG
                     QGSQGSSMMGQRPMAPYRPSQQGSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGH
                     GDYAYQQSSYTEQSYDRSFEESTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPS
                     QQSYPGQQQGYGSAQGAPSQYPGYQQGQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYG
                     NYQQ"
BASE COUNT         1034 a          872 c          860 g          952 t
ORIGIN      
        1 agggcagccg gagtatccac ctcgatgacc acgggctgag ccccgcgccg ccaccatgtc
       61 cgtggccttc gcgtctgccc ggccaagagg caaaggggag gttacgcagc aaaccatcca
      121 gaagatgctg gacgagaacc accacctgat ccagtgcatc ctggagtacc agagcaaggg
      181 caagacggcc gagtgcacgc agtaccagca gatcctgcac cggaacctgg tatacctggc
      241 cacgatcgca gactccaacc agaacatgca gtccctgctt cctgccccgc ccacgcagaa
      301 catgaacctg ggccctggag ccctgactca gagcggctcc agccagggcc tgcactctca
      361 gggcagcctg agtgacgcca tcagcacggg cctgccaccc tcctccctcc tgcagggcca
      421 gattggcaac gggccgagcc acgtgtccat gcagcagacg gcgcctaaca cgctgcccac
      481 cacctccatg agcatctctg ggcccggcta cagccacgcg ggacccgcct cgcagggcgt
      541 ccccatgcag gggcaaggca ccatcggcaa ctacgtgtct cggaccaaca tcaacatgca
      601 gtccaaccca gtctccatga tacagcagca ggcggccacg tcgcactaca gctcggcgca
      661 gggcggcagc cagcactacc agggccagtc gtccatcgcc atgatggggc agggcagcca
      721 ggggagcagc atgatggggc agcggcccat ggcgccctac cggccctccc agcaaggctc
      781 ttcccagcag tacctgggcc aggaggagta ctatggcgag cagtacagcc acagccaggg
      841 cgccgcggag cccatgggcc agcagtacta ccccgacggc catggcgatt acgcctacca
      901 gcagtcatcc tacacggagc agagctacga ccggtccttc gaggagtcca cgcagcacta
      961 ctatgagggg ggaaactccc agtacagcca gcagcaggcc gggtaccagc agggtgccgc
     1021 gcagcagcag acgtactccc agcagcagta ccccagccag cagagctacc ccgggcagca
     1081 gcagggctac gggtctgccc agggagcccc gtcacagtac cccggctacc agcaaggcca
     1141 aggccagcag tacggaagct accgagcacc gcagacagcg ccgtctgccc agcagcagcg
     1201 gccctacggc tatgaacagg gccagtatgg aaattaccag cagtaaggga cacacattct
     1261 ggctggagcc cttgtggtag cgtgttcatc caggggccgg atgggctggc ggcagctctg
     1321 gtgaattgtg acatgttggt tacctgttcg cccagtgcca cgtctgcatg tgaagcgtgc
     1381 tcatttcatg ctgggaccta cttgctcaga tctccaagca agcatttctt ttcttttagg
     1441 gatgtctgaa agtcacatcc agttacatta ctgtgttctt tctaatgaaa agtaaaggtt
     1501 ttatatagag aaacttgagt aatttttaca tttctaagac attaaatccc atttaaattc
     1561 tgtgtgaaca ttaaagacag cacacttgca aaagtatggt caaaggaaaa aaatcccaca
     1621 tttcaattaa caagtagcat ggacatttga tcaaccttta gttggaataa taatattcat
     1681 atttgctatg aatcctttta aaaaaatctt tggataaatg ctgacagatt tccaagaact
     1741 accaagaaaa tacaagagat atccaatgct tgatatatga ggcctagtaa taacgatatt
     1801 tctctttaat tgatgttttg ttttaaaagt taaaagtaat tcttggcgtg gtggttcacg
     1861 cctgtaatcc cagcactttg ggaggccgaa gcgggcggat cacctgaggt cgggagttcg
     1921 agaccagcct gaccaacatg gagaaacccc gtccctacta aaaatacaaa attagccagg
     1981 tatggtggtg catacctgta atcccagcta ctcgggaacc tgaggcagga gaatggcttg
     2041 aacccaggag acagaggttg tggtggggca agatcgcacc attgcacccg agcctaggca
     2101 acaagagtga aattccgtct caaaaaaata aataaataaa taagttaaaa ttaattcttt
     2161 atccagagtc gggtgcttta gaatttataa gtcacttatg tgttttgctt gaattaattc
     2221 tgacagcccc tatgaggaaa tctggaggca ggtaacagtt cccattttag agatgaagaa
     2281 ctgaggcaca gattaaagga cttgcctgtg ttgaatacca gtcctgttct aggacattct
     2341 cccctctcct aggagacgga tgtcacgcac aaatggggag agaagtgttt attttgtagg
     2401 cactaagggt ttctaaaacc cttaacactg gtaagggctc aaaaataaac gtatgtgttc
     2461 atattcgatc accgaaatga gagttcttaa ttgctaattg acaaacgcgt tagcaatttc
     2521 agttagggag tcatctccct tgattgtgtt cttttcctgt caattttcat agacctaatt
     2581 tgcaaactca atcggggact aaaatttccc actgaaaatg ttaaacattt tagataactg
     2641 tgaagatagt ttatttttat tccttgccaa tctgggaata tgcctttttt gtgtgtttgt
     2701 gtgttttttt aagtgctgta ttaataatac tttctgaaag aaaaggacac ttaccccaaa
     2761 acttcaatct gaaatgtctt acattaagaa tatcttgaat gttgtgtata tattttaaaa
     2821 agcactttgc aaaatagttt gtacatttat ttcctaattt atacatgatt tttggtgtta
     2881 atatatttaa tgattaataa cagaatgttt atttaatgtg ctgtccattt ttatgtaata
     2941 ttatggggaa agtgatgcca gcagttcctt ttcattattc tatcttctgt catatgaatg
     3001 ttgagcaaaa cttaggccaa catgaattgt ttgtgaagtg tggttgatgg tgctttgttt
     3061 ttttctgact acttctatgg aaggccagtg aagaagcaaa ggaagacatg aaaattgacg
     3121 ctcattcttc ttcctattgt tccctgacat ccagcaaatt gtgaatttga aaaatgatgg
     3181 ccagttttca gaagtgctga caaattcata ttggtatgca aaagctcatc acccattaag
     3241 gtttgttgtt gaatcaacag tactcagcat attaaaacag tacatcagaa ctcatgccaa
     3301 cagtctttat gatgggatta aggtggacaa gatctcctaa gatctgtgaa tgggattaag
     3361 gtggacaaga tctcctaaga tctgaaaaga aaccttaata cgctcatatg gttggagtgt
     3421 taagtgaacc tctgattttg tcagggtttt tctacgtgta ggcgtgaata gggggcaccc
     3481 cttcaaaact gtacaaagaa gacgactgtt ttccatttcc atttaaacat ttttagccac
     3541 ttcatttcta tttattgaac aggtcaaatt tgtcttgtta tttgtgagta cagtacattt
     3601 aaaaaacatc cttatcggtt attttttttt cagtcggagt ttgacgtata aattgtttat
     3661 gcttttggtg taatctctta ataaactggt tcttcaaaaa tcaaaaaaaa aaaaaaaa
//