LOCUS BC034469 2915 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 87, mRNA (cDNA clone
MGC:26170 IMAGE:4823402), complete cds.
ACCESSION BC034469
VERSION BC034469.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2915)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2915)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034469.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: f Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922668.
FEATURES Location/Qualifiers
source 1..2915
/db_xref="H-InvDB:HIT000051153"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26170 IMAGE:4823402"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2915
/gene="CCDC87"
/gene_synonym="FLJ10786"
/db_xref="GeneID:55231"
/db_xref="HGNC:HGNC:25579"
CDS 69..2618
/gene="CCDC87"
/gene_synonym="FLJ10786"
/codon_start=1
/product="coiled-coil domain containing 87"
/protein_id="AAH34469.1"
/db_xref="GeneID:55231"
/db_xref="HGNC:HGNC:25579"
/translation="MMEPPKPEPELQRFYHRLLRPLSLFPTRTTSPEPQKRPPQEGRI
LQSFPLAKLTVASLCSQVAKLLAGSGIAAGVPPEARLRLIKVILDELKCSWREPPAEL
SLSHKNNQKLRKRLEAYVLLSSEQLFLRYLHLLVTMSTPRGVFTESATLTRLAASLAR
DCTLFLTSPNVYRGLLADFQALLRAEQASGDVDKLHPVCPAGTFKLCPIPWPHSTGLA
QVQCSNLNLNYLIQLSRPPEFLNEPGRMDPVKELKSIPRLKRKKPFHWLPSIGKKREI
DISSSQMVSLPSYPVAPTSRASPSPFCPELRRGQSMPSLREGWRLADELGLPPLPSRP
LTPLVLATESKPELTGLIVAEDLKQLIKKMKLEGTRYPPLDSGLPPLLGVVTRHPAAG
HRLEELEKMLRNLQEEEASGQWDPQPPKSFPLHPQPVTITLKLRNEVVVQAAAVRVSD
RNFLDSFHIEGAGALYNHLAGELDPKAIEKMDIDNFVGSTTREVYKELMSHVSSDHLH
FDQGPLVEPAADKDWSTFLSSAFLRQEKQPQIINPELVGLYSQRANTLQSNTKKMPSL
PSLQATKSWEKWSNKASLMNSWKTTLSVDDYFKYLTNHETDFLHVIFQMHEEEVPVEI
VAPARESLEIQHPPPLLEDEEPDFVPGEWDWNTVLEHRLGAGKTPHLGEPHKILSLQK
HLEQLWSVLEVPDKDQVDMTIKYSSKARLRQLPSLVNAWERALKPIQLREALLARLEW
FEGQASNPNRFFKKTNLSSSHFLEENQVRSHLHRKLNLMESSLVSLLEEIELIFGEPV
IFKGRPYLDKMKSDKVEMLYWLQQQRRVRHLVSALKDPHQSTLFRSSAASL"
BASE COUNT 689 a 854 c 748 g 624 t
ORIGIN
1 gtcgagctcc tggttgcctt agtaacccct cggctttctg ttcctggacg gtggcggccg
61 ccggctctat gatggagccc ccgaagcccg agcctgagct ccagcggttt taccaccggc
121 tgctgcgtcc gctgtcgctc ttccccacta ggacgacgtc cccagagcct cagaagcgcc
181 ccccgcagga gggccggatt ctgcagtcct tccctctggc gaagctgacg gtggcgtcgc
241 tgtgcagcca ggtggccaag ctgctggccg gcagcgggat agcagcggga gtgcctcctg
301 aggcccgact acgtctcatc aaggtcatcc tggacgagct gaagtgcagc tggcgggagc
361 cgcccgccga acttagtctg agccacaaaa acaaccagaa gctgcggaag cggctcgagg
421 cctacgtgct gctgagcagc gagcagctct tcttgcgcta cctgcacctg ctggtgacca
481 tgtcgactcc caggggggtc ttcactgaat cagccaccct cacccggttg gccgccagcc
541 tcgccaggga ctgcacactc ttccttacta gtcccaacgt ctaccgtggc ctgcttgccg
601 acttccaggc cctgctgagg gcagagcagg cctctgggga tgtggacaag ctgcaccctg
661 tctgccccgc tgggacgttc aagctgtgcc ctatcccctg gcctcacagc actggcttag
721 cccaagtgca gtgctctaac ctcaacctga actacctcat ccaactcagc cgtccaccag
781 agtttctcaa tgagccagga aggatggatc cagtgaagga attgaagtcc atccctcggt
841 tgaagaggaa aaagcctttc cactggctgc cctccatagg aaagaagaga gaaatcgaca
901 tcagttcctc acagatggtg tcgctgccca gctatcctgt ggcccccacc agcagggctt
961 ccccctcgcc tttctgccct gagctccgga gaggccaatc catgccctcc ctgcgtgagg
1021 gctggaggct ggcagatgag ttgggccttc ctccactccc atctcgcccc ttaaccccgc
1081 tggtcttggc tacagagagc aaaccagagc tgactgggct catcgtggct gaggatctga
1141 agcagttgat aaagaagatg aagttggagg ggactcgcta cccaccactg gactcaggcc
1201 tgcctcctct cctgggggtt gtgacccgtc acccagctgc agggcatcgc ctggaggagc
1261 tggagaagat gttgaggaac ctccaggagg aagaagcctc tgggcagtgg gacccccagc
1321 cccccaaatc ctttccactt cacccacagc cagtgaccat tactttgaag cttagaaatg
1381 aggtcgtggt ccaggcggct gccgtacggg tctctgatag aaacttctta gactctttcc
1441 acattgaggg ggccggagcc ctgtataacc atctggctgg tgaactggat cccaaagcca
1501 ttgaaaaaat ggatattgat aactttgttg gcagtactac cagggaggtc tacaaggagt
1561 tgatgagcca tgtctcttct gaccacttac attttgatca agggccccta gttgagcctg
1621 cagcagataa agactggtcg accttcctgt cctcagcctt tctacgtcaa gaaaaacagc
1681 ctcaaatcat caaccctgag ctggttggac tttactccca gagagcaaac actttacagt
1741 ccaatactaa gaagatgccc tccctcccat cactccaagc taccaaaagc tgggagaagt
1801 ggtcaaacaa ggcctccttg atgaactcat ggaaaaccac cttgtctgtg gatgactact
1861 tcaagtacct caccaaccat gaaacagatt tccttcatgt catctttcaa atgcatgaag
1921 aagaggttcc tgtggagatt gtggcccctg ccagagagtc cctagagatt cagcaccctc
1981 ccccattgct agaagatgaa gaaccagact ttgtgccagg agagtgggat tggaacactg
2041 tgctagagca caggctagga gctgggaaga caccccacct gggagaaccc cacaaaattc
2101 tgagcctgca gaagcatctg gaacaactgt ggtctgtgct tgaggtccct gacaaggacc
2161 aggtggacat gaccattaaa tatagctcca aagcccgcct gaggcagctg ccttcattgg
2221 tgaatgcctg ggagcgggcc ctgaagccca ttcagctgcg ggaggcattg ctggcgagac
2281 tagagtggtt tgagggacaa gcttccaatc ccaaccgctt cttcaaaaag accaacttga
2341 gctccagtca cttcctggag gagaatcagg tccgaagcca tctccacagg aagctcaact
2401 taatggagtc ttctttggtt tccctcctag aggagataga gttaatcttt ggcgagccag
2461 tgatcttcaa ggggcggccc tacctggaca agatgaagag tgacaaagtg gagatgctct
2521 attggctgca acagcagcgg cgggttcgcc acctggtctc ggccctgaag gatccccacc
2581 agtcaaccct gttcaggagc tcagcagcca gcctttagta gctcctggga atacccctat
2641 tactccttga ccaggcccag tgccctcaaa tgcctccctc acccctaaat ggccagcagc
2701 tcatctagac ctctttactg ctttggaaga agaaatattt gtctatatct gggagtggag
2761 ggttcaggaa cattatgctt ccaactatga agggattgag actaaaacta ttgttttctt
2821 agtgaaattc tcatgaaaga atccccaagc ctagtagtcc cattatgtca agccttgcac
2881 aatacaagcc aaatctccta aaaaaaaaaa aaaaa
//