LOCUS BC034468 3700 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens FtsJ methyltransferase domain containing 1, mRNA (cDNA
clone MGC:26159 IMAGE:4824516), complete cds.
ACCESSION BC034468
VERSION BC034468.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3700)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3700)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222354.
FEATURES Location/Qualifiers
source 1..3700
/db_xref="H-InvDB:HIT000051152"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26159 IMAGE:4824516"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3700
/gene="FTSJD1"
/gene_synonym="AFT"
/db_xref="GeneID:55783"
/db_xref="HGNC:HGNC:25635"
CDS 133..2445
/gene="FTSJD1"
/gene_synonym="AFT"
/codon_start=1
/product="FTSJD1 protein"
/protein_id="AAH34468.1"
/db_xref="GeneID:55783"
/db_xref="HGNC:HGNC:25635"
/translation="MSKCRKTPVQQLASPASFSPDILADIFELFAKNFSYGKPLNNEW
QLPDPSEIFTCDHTELNAFLDLKNSLNEVKNLLSDKKLDEWHEHTAFTNKAGKIISHV
RKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKS
HRFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTG
LQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKM
FTMFEHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYKGREAIHPLLSKMT
LNFGTEMKRKALFPHHVIPDSFLKRHEECCVFFHKYQLETISENIRLFECMGKAEQEK
LNNLRDCAIQYFMQKFQLKHLSRNNWLVKKSSIGCSTNTKWFGQRNKYFKTYNERKML
EALSWKDKVAKGYFNSWAEEHGVYHPGQSSILEGTASNLECHLWHILEGKKLPKVKCS
PFCNGEILKTLNEAIEKSLGGAFNLDSKFRPKQQYSCSCHVFSEELIFSELCSLTECL
QDEQVVVPSNQIKCLLVGFSTLRNIKMHIPLEVRLLESAELTTFSCSLLHDGDPTYQR
LFLDCLLHSLRELHTGDVMILPVLSCFTRFMAGLIFVLHSCFRFITFVCPTSSDPLRT
CAVLLCVGYQDLPNPVFRYLQSVNELLSTLLNSDSPQQVLQFVPMEVLLKGALLDFLW
DLNAAIAKRHLHFIIQREREEIINSLQLQN"
BASE COUNT 1080 a 657 c 731 g 1232 t
ORIGIN
1 agagtaaagt gcagcctctc cagacactgg ggccccagtg ggcgtgggcg aagttgctgg
61 taggaggagt tggcggaagc acttggaact cctttataag tgtcagctgt gagattttaa
121 tttgatttga aaatgagtaa gtgcagaaag acaccagttc agcagctagc aagtcccgcg
181 tcattcagcc cagatattct tgctgacatt tttgaactct ttgccaagaa cttttcttat
241 ggcaagccac ttaataatga gtggcagtta ccagatccca gtgagatttt cacctgtgac
301 cacactgaac ttaatgcatt tcttgatttg aagaactccc taaatgaagt aaaaaaccta
361 ctgagtgata agaaactgga tgagtggcat gagcacactg ctttcactaa taaagcgggg
421 aaaatcattt ctcatgttag aaaatctgtg aatgctgaac tttgtactca agcatggtgt
481 aagttccatg agattttgtg cagctttcca cttattccac aggaagcttt tcagaatgga
541 aaactgaatt ctctacacct ttgtgaagct ccaggagctt ttatagctag tctcaaccac
601 tacttaaaat cccatcggtt tccttgtcat tggagttggg tagcgaatac tctgaatcca
661 taccatgaag caaatgacga cctcatgatg attatggatg accggcttat tgcaaatacc
721 ttgcactggt ggtactttgg tccagataac actggtgata tcatgaccct gaaattcttg
781 actggacttc agaatttcat aagcagcatg gctactgttc acttggtcac tgcagatggg
841 agttttgatt gccaaggaaa cccaggtgaa caagaagctt tagtttcttc tttgcattac
901 tgtgaagttg tcactgctct gaccactctt ggaaacggtg gctcttttgt tctaaagatg
961 tttactatgt ttgaacattg ttccataaac ttgatgtacc tgctaaactg ttgttttgac
1021 caagtccatg ttttcaaacc tgctactagc aaggcaggaa actccgaagt ctatgtggtt
1081 tgcctccact ataaggggag agaggccatc catcctctgt tatctaagat gaccttgaat
1141 tttgggactg aaatgaaaag gaaagccctt tttccccatc atgtgattcc tgattctttt
1201 cttaagagac atgaagaatg ttgtgtgttc tttcataaat atcagctaga gactatttct
1261 gaaaacattc gtctatttga gtgcatggga aaggcggaac aagaaaagct gaataattta
1321 agggattgtg ctatacaata ttttatgcaa aaatttcaac tgaaacatct ttccagaaat
1381 aattggctag taaaaaaatc tagtattggt tgtagtacaa atacaaaatg gtttgggcag
1441 aggaacaaat attttaaaac ttataatgaa aggaagatgc tagaagccct ttcatggaaa
1501 gataaagtag ccaaaggata ctttaatagt tgggctgaag aacatggtgt atatcatcct
1561 gggcagagtt ctattttaga aggaacagct tccaatcttg agtgtcactt atggcatatt
1621 ttggagggaa agaaactgcc aaaggtaaaa tgttctcctt tttgcaatgg tgaaatttta
1681 aaaactctta atgaagcaat tgaaaagtca ttaggaggag cttttaattt ggattccaag
1741 tttaggccaa aacagcagta ttcttgttct tgtcatgttt tttctgaaga actgatattt
1801 tccgagttgt gtagccttac tgagtgcctt caggatgagc aggttgtagt acccagcaat
1861 caaataaagt gcctgctggt gggcttttcg actctccgta atatcaaaat gcatataccg
1921 ttggaagttc gactcctaga atcagctgaa ctcacaactt ttagctgttc attgcttcat
1981 gatggagatc caacttacca gcgtttattt ttggactgcc ttctacattc attgcgggag
2041 cttcatacag gagatgttat gattttgcct gtactttctt gcttcacaag atttatggct
2101 ggtttgatct ttgtactcca cagttgtttt agattcatca cttttgtttg tcccacatcc
2161 tctgatcccc tgaggacctg cgcagtcctg ctatgtgttg gttatcagga ccttccaaat
2221 ccagttttcc gatatttgca gagtgtgaat gaattgttga gcactttgct caactctgac
2281 tcaccccagc aggttttaca gtttgtgcca atggaggtac tccttaaggg ggccctgctt
2341 gattttttgt gggatttgaa tgctgccatt gctaaaaggc atttgcattt cattattcaa
2401 agagagagag aagaaattat caacagcctt cagttacaaa actgaacata tgctttctga
2461 gattcaactt tatgatttct tataatttgc ccagtatttg catcctgttg ctctattaat
2521 ttaaaaacct tttattttgg ggaaaggcca acatttgcat cattcaaagt ctcattaatt
2581 ctggaaaacc atccattctg atctctaggg tatatacacc cacaggcata gagctcttcc
2641 acgtggtgga atctatgcaa tgatagatat tcacactcta aatatgaggt gtgtgtatgt
2701 gtatgggtgg ccacagccat gcttacctat gccatttagt tggtcttact taatctgctt
2761 aagatttgca tctgtgtacc tttgttcaga ttagtttttt ttttccagcc gatttcctct
2821 tagtggctaa tgctgttagt gaattttcca actaatttcc tctcattggt taatgttgtt
2881 aatgaattga gagaggtaat tgaggaaagg aaatgagtaa atcactgttc agcaacactg
2941 atttccgtta acacatcagt tatgaatttc agggaattca tctcgccaga ttcttgataa
3001 catgccattc attgccctta ggtgattgac cctattttct tacatggctc aaataaaact
3061 agtatgctgt tgtatgaatc ttttactgac cacaccatcc aactataaaa atataacggg
3121 acagctttaa accaaagatc atgtttagaa caatgaaaaa ttatttgttg tatctaatac
3181 acgcctgtat tgtgaaaagc ttcatttagc aatgatgtaa taatttttaa cttccaggaa
3241 ataatctgtg aatggaaaga ttttttaaga ttttgagata gtgtttagtc tcatgttggg
3301 aacacatgaa tgtgatgaac atagtgaata ctaaagaaaa cgcttcagac tttcagaatg
3361 atggttcaga atttaaaatt tttaatcttt tctaatttct ttttttcagt gtgaaaatag
3421 cactttacca aaagattagc catgaaatgg ttattttgcc agttacattt gatttctttt
3481 gtatctgcaa tgtaatgagt tattttattt cttctgtatt tgcagtgtaa tgagtttttg
3541 tggcaaagtg tattaagcaa tttttcatta tcttgaagtt ccacaaagtg gagaatattt
3601 atattctcac atgcatttta ggcacttttg atatgtgaaa atagatgtat tttctgatgc
3661 atttggttaa taaatattaa tcagaaaaaa aaaaaaaaaa
//