LOCUS BC034425 1514 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens blood vessel epicardial substance, mRNA (cDNA clone
MGC:42413 IMAGE:4821891), complete cds.
ACCESSION BC034425
VERSION BC034425.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1514)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1514)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59939904.
FEATURES Location/Qualifiers
source 1..1514
/db_xref="H-InvDB:HIT000042134"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42413 IMAGE:4821891"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1514
/gene="BVES"
/gene_synonym="HBVES"
/gene_synonym="MGC42413"
/gene_synonym="POP1"
/gene_synonym="POPDC1"
/db_xref="GeneID:11149"
/db_xref="HGNC:HGNC:1152"
/db_xref="MIM:604577"
CDS 158..1240
/gene="BVES"
/gene_synonym="HBVES"
/gene_synonym="MGC42413"
/gene_synonym="POP1"
/gene_synonym="POPDC1"
/codon_start=1
/product="blood vessel epicardial substance"
/protein_id="AAH34425.1"
/db_xref="GeneID:11149"
/db_xref="HGNC:HGNC:1152"
/db_xref="MIM:604577"
/translation="MNYTESSPLRESTAIGFTPELESIIPVPSNKTTCENWREIHHLV
FHVANICFAVGLVIPTTLHLHMIFLRGMLTLGCTLYIVWATLYRCALDIMIWNSVFLG
VNILHLSYLLYKKRPVKIEKELSGMYRRLFEPLRVPPDLFRRLTGQFCMIQTLKKGQT
YAAEDKTSVDDRLSILLKGKMKVSYRGHFLHNIYPCAFIDSPEFRSTQMHKGEKFQVT
IIADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLYSLNDPTLNDKKAKK
LEHQLSLCTQISMLEMRNSIASSSDSDDGLHQFLRGTSSMSSLHVSSPHQRASAKMKP
IEEGAEDDDDVFEPASPNTLKVHQLP"
BASE COUNT 446 a 319 c 321 g 428 t
ORIGIN
1 agagcgccga tggctgggga cccgaggtcc gcgccaccca cccgcaacct ccttccccga
61 gcctttggga acgggttgtt ggccagacaa gtcccagaaa ctgcctgctt tgaagcatga
121 ataagtgcga aaagactctt agcaatgaat tttcaaaatg aattatacag agtccagccc
181 attgagagaa tcaactgcca taggttttac acctgagtta gaaagtatca tacctgtgcc
241 ttccaataag accacttgtg aaaactggag agagatacat catctggttt ttcatgtagc
301 aaatatttgt tttgcagttg ggttggttat tccaactact cttcaccttc atatgatatt
361 tcttagggga atgttaactc taggatgtac cctttatatc gtctgggcca ctctctaccg
421 atgtgccttg gatataatga tctggaactc tgtgttcttg ggtgtcaaca ttttgcatct
481 gtcgtatctt ttatacaaga agagaccggt aaagattgaa aaggaactca gtggcatgta
541 ccggcgattg tttgaaccac tccgtgtgcc tccagatttg ttcagaagac taactggaca
601 gttttgcatg atccaaacct tgaaaaaggg ccaaacttat gctgcagagg ataaaacctc
661 agttgatgac cgtctgagta ttctcttgaa gggaaaaatg aaggtctcct atcgaggaca
721 ttttctgcat aacatttacc cctgtgcctt tatagattct cctgaattta gatcaactca
781 gatgcacaaa ggtgaaaaat tccaggtcac cattattgca gatgataact gcagattttt
841 atgctggtca agagaaagat taacatactt tctggaatca gaacctttct tgtatgaaat
901 ctttaggtat cttattggaa aagacatcac aaataagctc tactcattga atgatcccac
961 cttaaatgat aaaaaagcca aaaagctgga acatcagctc agcctctgca cacagatctc
1021 catgttggaa atgaggaaca gtatagccag ctccagtgac agtgacgacg gcttgcacca
1081 gtttcttcgg ggtacctcca gcatgtcctc tcttcatgtg tcatccccac accagcgagc
1141 ctctgccaag atgaaaccga tagaagaagg agcagaagat gatgatgacg tttttgaacc
1201 ggcatctcca aatacattga aagtccatca gctgccttga tcagagagag aattcaggtt
1261 accaagacgg aaggtgtctt gaagagatcc tgaaaaatac cagcactttt tcatggcttt
1321 taggttattc tgctttagtg catccagact ggtagagtcg gagggaggaa gtgaggaagg
1381 gtcaaggatg gaagagttct ttcacttacc ctttttatta gtcagctttt aaagtaattg
1441 ttttactgag ccttctgact atgccttgtt ctcttttgag atatatattt tcacagtcaa
1501 aaaaaaaaaa aaaa
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