LOCUS BC034406 1684 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens parvin, gamma, mRNA (cDNA clone MGC:35319
IMAGE:5178529), complete cds.
ACCESSION BC034406
VERSION BC034406.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1684)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1684)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: o Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51477697.
FEATURES Location/Qualifiers
source 1..1684
/db_xref="H-InvDB:HIT000042125"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35319 IMAGE:5178529"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1684
/gene="PARVG"
/db_xref="GeneID:64098"
/db_xref="HGNC:HGNC:14654"
/db_xref="MIM:608122"
CDS 406..1401
/gene="PARVG"
/codon_start=1
/product="parvin, gamma"
/protein_id="AAH34406.1"
/db_xref="GeneID:64098"
/db_xref="HGNC:HGNC:14654"
/db_xref="MIM:608122"
/translation="MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFE
ELQKVLMEWINATLLPEHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQ
KHKLTVVLEAVNRSLQLEEWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNV
QVEVITIESTKSGLKSEKLVEQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVN
FVNQKLDRLGLSVQNLDTQFADGVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVT
LALELLKDEGLLSCPVSPEDIVNKDAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN"
BASE COUNT 419 a 490 c 427 g 348 t
ORIGIN
1 gtgctgagat ctctccttct cgaaccctgc tatgcctttg catacgctgt tttctccacc
61 tgccacgttc tcaccccttc ttcttccact gcaaactcct atgcagccgt caaggcccca
121 ttctcctctg gaaagccttc ccgatcccct tggcaacaac caccaccaat atttattcac
181 tgagcccact ttgtgccaag cattgttcta gacacggaga ggaggaagct cctgccggct
241 gagcgggcct ggaggaagtg agcagcgggg ctcctgcctc ccggcctggt ccccgaagac
301 cccagaagaa cccggaactt gcttccattc ggaatccagg gaccaccctt tgcactcagt
361 aggcctttgt tttcctgcgt ggaaagcggt tgggcttggg aggcgatgga gccggagttc
421 ttgtacgacc tgctgcagct ccccaagggg gtggagcccc cagcggagga ggagctctca
481 aaaggaggaa agaagaaata cctgccaccc acttcccgga aggaccccaa atttgaagaa
541 ctgcagaagg tgttgatgga gtggatcaat gccactcttc tccccgagca cattgtggtc
601 cgcagcctgg aggaggacat gttcgacggg ctcatcctac accacctatt ccagaggctg
661 gcggcgctca agctggaagc agaggacatc gccctgacag ccacaagcca gaagcacaag
721 ctcacagtgg tgctggaggc cgtgaaccgg agtctgcagc tggaggagtg gcaggccaag
781 tggagcgtgg agagcatctt caacaaggac ctgttgtcta ccctgcacct ccttgtggcc
841 ctggccaagc gcttccagcc cgacctctcc ctcccaacca acgtccaggt ggaggtcatc
901 actatcgaga gcaccaaaag tggtctgaag tcagagaagt tggtggaaca gctcactgaa
961 tacagcacag acaaggacga gcctccaaag gacgtctttg atgaattatt taagctggct
1021 ccggagaaag tgaacgcagt gaaagaggcc atcgtgaact ttgtcaacca gaagctggac
1081 cgcctgggcc tgtctgtgca gaatctggac acccagtttg cagatggggt catcttactc
1141 ttgctgattg gacaacttga aggcttcttc ctgcacttaa aggaattcta cctcactccc
1201 aactctcctg cagaaatgct gcacaacgtc accctggcgc tggagctgct gaaggacgag
1261 ggcctgctca gctgccctgt cagccctgaa gatatcgtga acaaggatgc caagagcaca
1321 ctgcgggtgc tctatggtct gttctgcaag cacacgcaga aggcacacag ggacaggacg
1381 ccccatggag ccccgaattg accctcactg cctccaaagc ccagagcctg cctgtcagcc
1441 cagctggagg gcccgaggct gcagggtgtc ctcccacagt cccgctgttt cctgtgcatt
1501 cgtgacccgc ttccctccca ccctgtctcc tgtctccatc gttggattat ctttgaaccc
1561 ccttgtgtgg atcattttga gccgcctggc cttgctcagt ttattttaat aaaagtattt
1621 ctgggaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaa
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