LOCUS BC034320 1030 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens fragile X mental retardation 1 neighbor, mRNA (cDNA
clone MGC:42907 IMAGE:4836772), complete cds.
ACCESSION BC034320
VERSION BC034320.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1030)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1030)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749198.
FEATURES Location/Qualifiers
source 1..1030
/db_xref="H-InvDB:HIT000042094"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42907 IMAGE:4836772"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1030
/gene="FMR1NB"
/gene_synonym="FLJ25736"
/gene_synonym="NY-SAR-35"
/db_xref="GeneID:158521"
/db_xref="HGNC:HGNC:26372"
CDS 75..842
/gene="FMR1NB"
/gene_synonym="FLJ25736"
/gene_synonym="NY-SAR-35"
/codon_start=1
/product="fragile X mental retardation 1 neighbor"
/protein_id="AAH34320.1"
/db_xref="GeneID:158521"
/db_xref="HGNC:HGNC:26372"
/translation="MSSHRRKAKGRNRRSHRAMRVAHLELATYELAATESNPESSHPG
YEAAMADRPQPGWRESLKMRVSKPFGMLMLSIWILLFVCYYLSYYLCSGSSYFVLANG
HILPNSENAHGQSLEEDSALEALLNFFFPTTCNLRENQVAKPCNELQDLSESECLRHK
CCFSSSGTTSFKCFAPFRDVPKQMMQMFGLGAISLILVCLPIYCRSLFWRSEPADDLQ
RQDNRVVTGLKKQRRKRKRKSEMLQKAARGREEHGDE"
BASE COUNT 287 a 220 c 269 g 254 t
ORIGIN
1 ggaggcttct gggccacgga ctgccggacc gttgggctgt gaggcagcgt ctcagcgagg
61 cggcacccgg agccatgtct tcacatagga ggaaagcgaa ggggaggaat aggagaagtc
121 accgtgccat gcgtgtggct cacttagagc tggcaactta tgagttggcg gcaactgagt
181 cgaatcccga gagcagccat cctggatacg aggccgccat ggctgacagg cctcagccag
241 gatggcggga atctctaaag atgcgggtca gcaaaccctt tgggatgctc atgctctcca
301 tttggatcct gctgttcgtg tgctactacc tgtcctacta cctgtgctcc gggtcctcat
361 attttgtgct tgcaaatgga catatcctgc ccaacagtga aaatgctcat ggccaatctc
421 tggaagaaga ttccgcattg gaagctttgc tgaatttttt ctttccaaca acttgcaatc
481 tgagggaaaa tcaggtggca aagccttgta atgagctgca agatcttagt gagagtgaat
541 gtttgagaca caaatgctgt ttttcatcat cggggaccac gagcttcaaa tgttttgctc
601 catttagaga tgtgcctaaa cagatgatgc aaatgtttgg gcttggtgcg atcagcctta
661 tcctggtatg tctgcccatt tattgccgct ctcttttctg gaggagcgaa ccggccgatg
721 atttacaaag gcaggacaac agagttgtaa cgggtttgaa gaaacaaaga aggaagcgaa
781 agaggaagtc tgaaatgtta cagaaagcag caagaggacg tgaggaacat ggtgacgagt
841 agcaagagac caaagcatta ttttcccctc aagacaacag aaaccattca gagcagaggg
901 gactgtctca gccatgcaaa cctcatggag cattttggaa agttaaaaat tgattcttat
961 ttttgtcatg tttactttca aacatgaaat aaaattgagt tctgttttca tgcaccaaaa
1021 aaaaaaaaaa
//