LOCUS BC034246 2157 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens embryonal Fyn-associated substrate, mRNA (cDNA clone MGC:17165 IMAGE:4214788), complete cds. ACCESSION BC034246 VERSION BC034246.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2157) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2157) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: n Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14589877. FEATURES Location/Qualifiers source 1..2157 /db_xref="H-InvDB:HIT000042081" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17165 IMAGE:4214788" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2157 /gene="EFS" /gene_synonym="EFS1" /gene_synonym="EFS2" /gene_synonym="HEFS" /gene_synonym="SIN" /db_xref="GeneID:10278" /db_xref="HGNC:HGNC:16898" /db_xref="MIM:609906" CDS 157..1563 /gene="EFS" /gene_synonym="EFS1" /gene_synonym="EFS2" /gene_synonym="HEFS" /gene_synonym="SIN" /codon_start=1 /product="embryonal Fyn-associated substrate" /protein_id="AAH34246.1" /db_xref="GeneID:10278" /db_xref="HGNC:HGNC:16898" /db_xref="MIM:609906" /translation="MAIATSVYVVPPPARPCPTSGPPAGPCPPSPDLIYKIPRASGTQ LAAPRDALEVYDVPPTALRVPSSGPYDCPASFSHPLTRVAPQPPGEDDAPYDVPLTPK PPAELEPDLEWEGGREPGPPIYAAPSNLKRASALLNLYEAPEELLADGEGGGTDEGIY DVPLLGPEAPPSPEPPGALASHDQDTLAQLLARSPPPPHRPRLPSAESLSRRPLPALP VPEAPSPSPVPSPAPGRKGSIQDRPLPPPPPRLPGYGGPKVEGDPEGREMEDDPAGHH NEYEGIPMAEEYDYVHLKGMDKAQGSRPPDQACTGDPELPERGMPAPQEALSPGEPLV VSTGDLQLLYFYAGQCQSHYSALQAAVAALMSSTQANQPPRLFVPHSKRVVVAAHRLV FVGDTLGRLAASAPLRAQVRAAGTALGQALRATVLAVKGAALGYPSSPAIQEMVQCVT ELAGQALQFTTLLTSLAP" BASE COUNT 426 a 707 c 607 g 417 t ORIGIN 1 gtgggttttc tttctcctcc tccaaccttg gcggaggcca cgactcaggc gccacagctg 61 ggggctagag gccgcggacc atggtgcggg gcagccaccg ctgaagtcag caaaaccgag 121 cctggcctga ggcaggctgc gcgggaggcc aaagccatgg ccattgccac gtcggtgtat 181 gtggtgccgc ccccagctcg gccctgtcca acctcaggac ctccagctgg accttgccca 241 ccctctcctg acctcatcta caaaatcccc agagctagtg ggacccagct ggctgctccc 301 agagatgcct tggaggtcta cgatgtgccc cccaccgccc tccgggtgcc ctccagtggc 361 ccctatgact gccctgcctc cttttcccac cctctgaccc gggttgcccc gcagccccct 421 ggagaggatg atgctcccta tgatgtgcct ctgaccccaa agccacctgc agagctggaa 481 ccagatctgg agtgggaagg aggccgggag ccggggcccc ccatctatgc tgccccctcc 541 aacctgaaac gagcgtcagc cttactcaat ttgtatgaag cacccgagga actgctggca 601 gacggggagg gcgggggcac tgatgagggg atctacgatg tgcctctgct ggggccagag 661 gctccccctt ctccagagcc ccctggagcc ttggcctccc atgaccagga caccctggcc 721 cagcttctgg ccagaagccc cccaccccca cacaggcccc ggctcccctc agctgagagc 781 ctgtcccgcc gccctctgcc tgccctgcct gtccctgagg cccccagccc ctccccagtg 841 ccctctcctg ccccaggccg gaagggcagc atccaggacc ggcctctgcc cccaccccca 901 ccccgcctgc ctggttatgg aggccccaag gtcgaggggg atccagaggg cagggagatg 961 gaggatgacc cagcaggaca ccacaatgag tacgagggca ttccgatggc cgaggagtat 1021 gactatgtcc acctgaaggg catggacaaa gctcagggat ctaggccccc ggatcaggcc 1081 tgcacagggg atcctgaact gcccgagagg gggatgccgg cgccgcagga ggccctgtcc 1141 ccaggggagc cactggttgt gtccaccgga gatctgcagc tcctgtactt ctatgctggg 1201 caatgccaga gccactactc agccctgcag gcagccgtgg cagccctgat gtccagtacc 1261 caggctaatc agcccccgcg ccttttcgtg ccccacagca agagggtggt ggtggctgct 1321 catcgcctgg tgtttgttgg ggacaccctg ggccggctgg cagcctctgc ccctctgaga 1381 gcacaggtca gggctgcagg tacagcactg ggccaggcat tgcgggccac tgtgctggct 1441 gtcaagggag ctgccctggg ctacccatcc agccctgcca tccaagagat ggtgcagtgt 1501 gtaacagaac tggcagggca ggccctgcaa ttcactaccc tgctcactag cctggctcca 1561 tgaaggtcct ttggcacagc tctgctcctc ccctgcctgc caaagccccc ctttaggcct 1621 tgggtggctg gaaggctttg ttaagggact aggagaaatg ggggtatctt tcccctttcc 1681 tgccctttct gctcatctca acctctcaca gaggtgtctt ctccccctaa cctacagctt 1741 tttgtacaag ccattttgtg taaattattt atatttaata ttattccctg ctttgtcagg 1801 agcaggtact aggctctggg gcagtgagga actagatcct tctctcctca gcctagggtg 1861 gaggtcactg cactaccacc cacctctgga agactggctg tgaaaagtca ggtggcagaa 1921 acctggggcc acatagagcc tctctctttt cctgtttctt ggctctagaa gatcagcact 1981 gcactgttag ctgagagtgc gggcaagaca taaactgtcc agagtttgaa ggttctcgga 2041 aagaccggag ggcttctccc cacagaaggc ggagagagct ggggctcaga catgggtgtg 2101 caccttaata aaccctgctg tctgccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa //