LOCUS BC034245 2147 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens cartilage acidic protein 1, mRNA (cDNA clone MGC:16989 IMAGE:4178363), complete cds. ACCESSION BC034245 VERSION BC034245.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2147) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2147) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: h Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8922351. FEATURES Location/Qualifiers source 1..2147 /db_xref="H-InvDB:HIT000042080" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16989 IMAGE:4178363" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2147 /gene="CRTAC1" /gene_synonym="ASPIC1" /gene_synonym="CEP-68" /gene_synonym="FLJ10320" /db_xref="GeneID:55118" /db_xref="MIM:606276" CDS 249..1604 /gene="CRTAC1" /gene_synonym="ASPIC1" /gene_synonym="CEP-68" /gene_synonym="FLJ10320" /codon_start=1 /product="CRTAC1 protein" /protein_id="AAH34245.1" /db_xref="GeneID:55118" /db_xref="MIM:606276" /translation="MDPEASDLSRGILALRDVAAEAGVSKYTGGRGVSVGPILSSSAS DIFCDNENGPNFLFHNRGDGTFVDAAASAGVDDPHQHGRGVALADFNRDGKVDIVYGN WNGPHRLYLQMSTHGKVRFRDIASPKFSMPSPVRTVITADFDNDQELEIFFNNIAYRS SSANRLFRVIRREHGDPLIEELNPGDALEPEGRGTGGVVTDFDGDGMLDLILSHGESM AQPLSVFRGNQGFNNNWLRVVPRTRFGAFARGAKVVLYTKKSGAHLRIIDGGSGYLCE MEPVAHFGLGKDEASSVEVTWPDGKMVSRNVASGEMNSVLEILYPRDEDTLQDPAPLE CGQGFSQQENGHCMDTNECIQFPFVCPRDKPVCVNTYGSYRCRTNKKCSRGYEPNEDG TACVGTLGQSPGPRPTTPTAAAATAAAAAAAGAATAAPVLVDGDLNLGSVVKESCEPS C" misc_feature 1293..1436 /gene="CRTAC1" /gene_synonym="ASPIC1" /gene_synonym="CEP-68" /gene_synonym="FLJ10320" /note="EGF_CA; Region: Calcium-binding EGF-like domain" /db_xref="CDD:smart00179" BASE COUNT 489 a 601 c 631 g 426 t ORIGIN 1 aggagatcta cttcctcaac accaataatg ccttctcggg ggtggccacg tacaccgaca 61 agttgttcaa gttccgcaat aaccggtggg aagacatcct gagcgatgag gtcaacgtgg 121 cccgtggtgt ggccagcctc tttgccggac gctctgtggc ctgtgtggac agaaagggct 181 ctggacgcta ctctatctac attgccaatt acgcctacgg taatgtgggc cctgatgccc 241 tcattgaaat ggaccctgag gccagtgacc tctcccgggg cattctggcg ctcagagatg 301 tggctgctga ggctggggtc agcaaatata cagggggccg aggcgtcagc gtgggcccca 361 tcctcagcag cagtgcctcg gatatcttct gcgacaatga gaatgggcct aacttccttt 421 tccacaaccg gggcgatggc acctttgtgg acgctgcggc cagtgctggt gtggacgacc 481 cccaccagca tgggcgaggt gtcgccctgg ctgacttcaa ccgtgatggc aaagtggaca 541 tcgtctatgg caactggaat ggcccccacc gcctctatct gcaaatgagc acccatggga 601 aggtccgctt ccgggacatc gcctcaccca agttctccat gccctcccct gtccgcacgg 661 tcatcaccgc cgactttgac aatgaccagg agctggagat cttcttcaac aacattgcct 721 accgcagctc ctcagccaac cgcctcttcc gcgtcatccg tagagagcac ggagaccccc 781 tcatcgagga gctcaatccc ggcgacgcct tggagcctga gggccggggc acagggggtg 841 tggtgaccga cttcgacgga gacgggatgc tggacctcat cttgtcccat ggagagtcca 901 tggctcagcc gctgtccgtc ttccggggca atcagggctt caacaacaac tggctgcgag 961 tggtgccacg cacccggttt ggggcctttg ccaggggagc taaggtcgtg ctctacacca 1021 agaagagtgg ggcccacctg aggatcatcg acgggggctc aggctacctg tgtgagatgg 1081 agcccgtggc acactttggc ctggggaagg atgaagccag cagtgtggag gtgacgtggc 1141 cagatggcaa gatggtgagc cggaacgtgg ccagcgggga gatgaactca gtgctggaga 1201 tcctctaccc ccgggatgag gacacacttc aggacccagc cccactggag tgtggccaag 1261 gattctccca gcaggaaaat ggccattgca tggacaccaa tgaatgcatc cagttcccat 1321 tcgtgtgccc tcgagacaag cccgtatgtg tcaacaccta tggaagctac aggtgccgga 1381 ccaacaagaa gtgcagtcgg ggctacgagc ccaacgagga tggcacagcc tgcgtgggga 1441 ctctcggcca gtcaccgggc ccccgcccca ccacccccac cgctgctgct gccactgccg 1501 ctgctgctgc cgctgctgga gctgccactg ctgcaccggt cctcgtagat ggagatctca 1561 atctggggtc ggtggttaag gagagctgcg agcccagctg ctgagcaggg gtgggacatg 1621 aaccagcgga tggagtccag caggggagtg ggaaagtggg cttgtgctgc tgcctagaca 1681 gtagggatgt aaaggcctgg gagctagacc ctccccaagc ccatccatgc acattactta 1741 gctaacaatt agggagactc gtaaggccag gccctgtgct gggcacatag ctgtgatcac 1801 agcagacagg gtcgctgccc tgatggcgct tacattccag tgggtctaat gaccatatct 1861 taggacacag atgtgcccag ggaggtggtg tcactgcaca ggaagtatga ggactttagt 1921 gtcctgagtt caaatcctga ttcaggaact cacaaagcta tgtgacctta caccagtcac 1981 ttaacttgtt agccatccat tatcgcatct gcaaaatggg gattaagaat agaatcttgg 2041 ggttagtgtg gagattagat taaatgtatg taagacactt ggcacaaaac ctggcacata 2101 gtaaaggctc aataaaaaca agtgcctctc aaaaaaaaaa aaaaaaa //