LOCUS BC034237 3300 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens smoothelin, mRNA (cDNA clone MGC:9460 IMAGE:3912887),
complete cds.
ACCESSION BC034237
VERSION BC034237.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3300)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3300)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034237.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: j Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913393.
FEATURES Location/Qualifiers
source 1..3300
/db_xref="H-InvDB:HIT000042078"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9460 IMAGE:3912887"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3300
/gene="SMTN"
/db_xref="GeneID:6525"
/db_xref="HGNC:HGNC:11126"
/db_xref="MIM:602127"
CDS 210..2957
/gene="SMTN"
/codon_start=1
/product="smoothelin"
/protein_id="AAH34237.1"
/db_xref="GeneID:6525"
/db_xref="HGNC:HGNC:11126"
/db_xref="MIM:602127"
/translation="MADEALAGLDEGALRKLLEVTADLAERRRIRSAIRELQRQELER
EEEALASKRFRAERQDNKENWLHSQQREAEQRAALARLAGQLESMNDVEELTALLRSA
GEYEERKLIRAAIRRVRAQEIEAATLAGRLYSGRPNSGSREDSKGLAAHRLEQCEVPE
REEQEQQAEVSKPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASPSSSPTPASPEPPL
EPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQ
SPTRGPSDTKRADVAGPRPCQRSLSVLSPRQPAQNRESTPLASGPSSFQRAGSVRDRV
HKFTSDSPMAARLQDGTPQAALSPLTPARLLGPSLTSTTPASSSSGSSSRGPSDTSSR
FSKEQRGVAQPLAQLRSCPQEEGPRGRGLAARPLENRAGGPVARSEEPGAPLPVAVGT
AEPGGSMKTTFTIEIKDGRGQASTGRVLLPTGNQRAELTLGLRAPPTLLSTSSGGKST
ITRVNSPGTLARLGSVTHVTSFSHAPPSSRGGCSIKMEPEPAEPLAAAVEAANGAEQT
RVNKAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDQRD
KERERRLQEARGRPGEGRGNTATETTTRHSQRAADGSAVSTVTKTERLVHSNDGTRTA
RTTTVESSFVRRSENGSGSTMMQTKTFSSSSSSKKMGSIFDREDQASPRAGSLAALEK
RQAEKKKELMKAQSLPKTSASQARKAMIEKLEKEGAAGSPGGPRAAVQRSTSFGVPNA
NSIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNR
RQNFEVAFSSAETHADCPQLLDTEDMVRLREPDWKCVYTYIQEFYRCLVQKGLVKTKK
S"
BASE COUNT 706 a 1074 c 1025 g 495 t
ORIGIN
1 ggggacggtt gctgagcggg cctgggacag cgggtcgcgg cacctcccgc ctgcgcgtgt
61 ctaatccgtc tgtcgggtcc cgaaagagct aagccgagcc tgcgccggac gggtgggctg
121 gactgagaga attctctgag ctggtgacag gtgccacagg cactggggat ctcaccagaa
181 aggaaccgac ggagctaggg gccagcgaga tggcggacga ggccttagct gggctggatg
241 agggagccct tcggaagctg ctggaggtca cagcagatct ggcagagcgg cggcgcatcc
301 gctcagccat ccgggaactg cagcggcagg agctggagcg cgaggaggag gccctggcat
361 ccaagcgttt ccgtgccgag cggcaggaca acaaggagaa ctggctgcac tctcagcagc
421 gggaagctga gcagcgggct gccctggcac ggctggcagg gcagctggag tccatgaacg
481 atgtggagga attgactgca ctgttgcgaa gcgctggtga gtatgaggag cgcaagctga
541 tccgagctgc catccgccgt gtacgggctc aggagattga ggctgccacc ttggctggga
601 ggttgtacag cgggcgtccc aacagtggct caagagagga cagcaagggg ctagcggcac
661 acaggctgga acagtgtgag gtgccagagc gagaggaaca ggaacagcag gcagaggttt
721 caaagccaac ccccacccct gaaggcacca gccaggatgt gaccacagtg acactcctgc
781 tgcgagcccc acctgggagc acatccagct cacctgcctc acccagcagt tcacccaccc
841 ctgcctctcc tgagcctcca ttggagcctg ccgaggccca gtgccttaca gctgaggttc
901 caggcagccc agagccaccc cccagcccac ccaagaccac cagccctgag cctcaggagt
961 ctccaacgct ccccagcact gagggccagg tggtcaacaa gcttctgtct ggccccaaag
1021 agacccctgc tgcccagagc cccaccagag gcccctctga caccaagaga gcagacgtgg
1081 ctggaccccg accctgccaa cgctccctgt cggtgctcag cccccgccaa ccagcccaga
1141 accgagagtc cacccccctt gccagcggac cttcctcatt ccagcgggct ggctctgtgc
1201 gggatcgtgt ccacaagttc acatctgatt ctcctatggc tgctaggctc caggatggca
1261 caccccaggc tgccctaagt cccctgaccc ccgcaaggct cctgggcccc tccctcacca
1321 gcaccacccc tgcctcctcc tccagcggct cctcctctcg gggccccagt gatacctcct
1381 cccggttcag caaggagcaa cgaggagtag cccagcccct ggcccagctt cgaagctgcc
1441 cccaggagga gggccccagg gggcggggct tggctgctag gccccttgaa aacagagcag
1501 gggggcctgt ggcacgttca gaggagcctg gtgccccgct gcccgtggcc gtcggcactg
1561 ccgagccagg gggcagtatg aagaccacat tcaccatcga gatcaaggac ggccgtggcc
1621 aggcctccac aggccgggtg ctgctgccca caggcaacca gagggcagaa ctgacactgg
1681 ggctgcgggc gcccccgacc ctactcagca ccagtagtgg gggcaagagc accatcaccc
1741 gtgtcaacag ccctgggacc ctggctcggc tgggcagtgt cactcatgtc accagcttca
1801 gccatgcccc ccccagtagc cgaggaggct gcagcatcaa gatggaacca gagccagcag
1861 agcctctcgc tgcagcagtg gaagcggcca atggggctga gcagacccga gtgaacaaag
1921 caccagaagg gcggagccct ctgagcgctg aggagctgat gactattgag gatgaaggag
1981 tcttggacaa gatgctggat cagagcacgg actttgaaga gcggaagctc atccgggctg
2041 cacttcgtga gctccgacaa aggaagagag accagcggga caaggagcgg gaacggcggc
2101 tgcaggaggc acggggccgg ccaggggagg ggcgcggcaa cacagccact gagaccacca
2161 cgaggcacag ccagcgggca gctgatggct ctgctgtcag cactgttacc aagactgagc
2221 ggctcgtcca ctccaatgat ggcacacgga cggcccgcac caccacagtg gagtcgagtt
2281 tcgtgaggcg ctcggagaat ggcagtggca gcaccatgat gcaaaccaag accttctcct
2341 cttcctcctc atccaagaag atgggcagca tcttcgaccg cgaggaccag gccagcccac
2401 gggccggcag cctggcggcg ctcgagaaac ggcaggccga gaagaagaaa gagctgatga
2461 aggcgcagag tctgcccaag acctcagcct cccaggcgcg caaggccatg attgagaagc
2521 tggagaagga gggcgcggcc ggcagccctg gcggaccccg cgcagccgtg cagcgatcca
2581 ccagcttcgg ggtccccaac gccaacagca tcaagcagat gctgctggac tggtgtcgag
2641 ccaagactcg cggctacgag cacgtcgaca tccagaactt ctcctccagc tggagtgatg
2701 ggatggcctt ctgtgccctg gtgcacaact tcttccctga ggccttcgac tatgggcagc
2761 ttagccctca gaaccgacgc cagaacttcg aggtggcctt ctcatctgcg gagacccatg
2821 cggactgccc gcagctcctg gatacagagg acatggtgcg gcttcgagag cctgactgga
2881 agtgcgtgta cacgtacatc caggaattct accgctgtct ggtccagaag gggctggtaa
2941 aaaccaaaaa gtcctaaccc ctgctcgggg ccccacggat gctggtggac tgtgtgcccc
3001 tggtggaggt ggacgacatg atgatcatgg gcaagaagcc tgaccccaag tgtgtcttca
3061 cctatgtgca gtcgctctac aaccacctgc gacgccacga actgcgcctg cgcggcaaga
3121 atgtctagcc tgcccgcccg catggccagc cagtggcaag ctgccgcccc cactctccgg
3181 gcaccgtctc ctgcctgtgc gtccgcccac cgctgccctg tctgttgcga caccctcccc
3241 cccacataca cacgcagcgt tttgataaat tattggtttt caacgaaaaa aaaaaaaaaa
//