LOCUS BC034036 4424 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens potassium inwardly-rectifying channel, subfamily J,
member 10, mRNA (cDNA clone IMAGE:4811633), partial cds.
ACCESSION BC034036
VERSION BC034036.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4424)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4424)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: i Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25121965.
FEATURES Location/Qualifiers
source 1..4424
/db_xref="H-InvDB:HIT000042053"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4811633"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..4424
/gene="KCNJ10"
/gene_synonym="BIRK-10"
/gene_synonym="KCNJ13-PEN"
/gene_synonym="KIR1.2"
/gene_synonym="KIR4.1"
/db_xref="GeneID:3766"
/db_xref="MIM:602208"
CDS <1..1282
/gene="KCNJ10"
/gene_synonym="BIRK-10"
/gene_synonym="KCNJ13-PEN"
/gene_synonym="KIR1.2"
/gene_synonym="KIR4.1"
/codon_start=2
/product="KCNJ10 protein"
/protein_id="AAH34036.2"
/db_xref="GeneID:3766"
/db_xref="MIM:602208"
/translation="FSDPSSGFKSPGTARRTALLLTPARPVRPSVPLPRGPSKGPLHL
GPKMTSVAKVYYSQTTQTESRPLMGPGIRRRRVLTKDGRSNVRMEHIADKRFLYLKDL
WTTFIDMQWRYKLLLFSATFAGTWFLFVVVWYLVAVAHGDLLELDPPANHTPCVVQVH
TLTGAFLFSLESQTTIGYGFRYISEECPLAIVLLIAQLVLTTILEIFITGTFLAKIAR
PKKRAETIRFSQHAVVASHNGKPCLMIRVANMRKSLLIGCQVTGKLLQTHQTKEGENI
RLNQVNVTFQVDTASDSPFLILPLTFYHVVDETSPLKDLPLRSGEGDFELVLILSGTV
ESTSATCQVRTSYLPEEILWGYEFTPAISLSASGKYIADFSLFDQVVKVASPSGLRDS
TVRYGDPEKLKLEESLREQAEKEGSALSVRISNV"
BASE COUNT 1174 a 1120 c 992 g 1138 t
ORIGIN
1 cttttctgat cccagctccg ggtttaagag tcctggcacg gcccgtcgca cagctctgct
61 cctaactcct gcccgccccg tccgtccatc tgtcccgctg ccccgcggcc catccaaggg
121 gccactccac ctcggaccca agatgacgtc agttgccaag gtgtattaca gtcagaccac
181 tcagacagaa agccggcccc taatgggccc agggatacga cggcggagag tcctgacaaa
241 agatggtcgc agcaacgtga gaatggagca cattgccgac aagcgcttcc tctacctcaa
301 ggacctgtgg acaaccttca ttgacatgca gtggcgctac aagcttctgc tcttctctgc
361 gacctttgca ggcacatggt tcctctttgt cgtggtgtgg tatctggtag ctgtggcaca
421 tggggacctg ctggagctgg accccccggc caaccacacc ccctgtgtgg tacaggtgca
481 cacactcact ggagccttcc tcttctccct tgaatcccaa accaccattg gctatggctt
541 ccgctacatc agtgaggaat gtccactagc cattgtgctt cttattgccc agctggtgct
601 caccaccatc ctggaaatct tcatcacagg taccttcctg gcgaagattg cccggcccaa
661 gaagcgggct gagaccattc gtttcagcca gcatgcagtt gtggcctccc acaatggcaa
721 gccctgcctc atgatccgag ttgccaatat gcgcaaaagc ctcctcattg gctgccaggt
781 gacaggaaaa ctgcttcaga cccaccaaac caaggaaggg gagaacatcc ggctcaacca
841 ggtcaatgtg actttccaag tagacacagc ctctgacagc cccttcctta ttctacccct
901 taccttctat catgtggtag atgagaccag tcccttgaaa gatctccctc ttcgcagtgg
961 tgagggtgac tttgagctgg tgctgatcct aagtgggaca gtggagtcca ccagtgccac
1021 ctgtcaggtg cgcacttcct acctgccaga ggagatcctt tggggctacg agttcacacc
1081 tgccatctca ctgtcagcca gtggtaaata catagctgac tttagccttt ttgaccaagt
1141 tgtgaaagtg gcctctccta gtggcctccg tgacagcact gtacgctacg gagaccctga
1201 aaagctcaag ttggaggagt cattaaggga gcaagctgag aaggagggca gtgcccttag
1261 tgtgcgcatc agcaatgtct gatgacctgt tcccactccc ccattcctct ggtctctttt
1321 cctctcttcc aatgccctgg taaggaatac tacccgggtt tactggagat cccccgaagc
1381 acccatcctc cactccctct tctttaaccc agtggtctgt tggtagctta ggccaactgg
1441 agtccaggtt cgcctcccac tgtccccttt ccacttcccc agcttctgcc ccaatacaca
1501 tacctccctt aagccaggat gggggaaaga gtgggattag gctgaagtgg cttagaaggc
1561 ctcagccatg cttggatact cacattagga ggaccatgtg gttggaagga tagactgccc
1621 cctacctccc accaccacca tgaagtttgg tgacttgagg ctggagctcc ctctgttacc
1681 tttccatcta gcaagttccc aaaggcaaga ctctctctga tggtcacttt gtggtctgtg
1741 ctttcagaaa tacaggaatc tgatatcaac atatcctagg gtttctacca atctctgttg
1801 aaagaagcca gggtttgcca ctgtgaagct tgatttctgc tggtgacttc tgaccataag
1861 ctagaaccat ggtcgccact gttttccctc tgtagtttct caagtgaaca ctctcaggat
1921 acccagttcc ctcatagcct ctgttctcag agaattggag ttggcccaag aaacataaac
1981 atataaccac ccatatctat cctggattct gaactcttca atttggagtg actaacacaa
2041 gttgttatct aaacctttaa acctatcttc caggcagccc agagaagatc tgtttccctg
2101 tgtcctgtga atggaaggac ccaagccaat atgttccttt gaaaagagtc cagtacccag
2161 gccccatgga aaggtctgaa aataatattc cagattacac tgtacctggc ttctcttctt
2221 cctttcctgc tcagcctaga tccttcttcc ttaaccccaa ctctttggga gaagggaggg
2281 aaaatgcaag ggccttcctc tcttaacacg gatgctcaag taaaactaga ttcacagggc
2341 acagattccc cagaaagtta acacaatccc accatgaggg atgggtaaat tctcagattt
2401 ccaaactgct gtacagagcc tctgagaatt ggtgatgctt tgttaaggtt tgggcaggag
2461 cagaactctg tggctggcag ccactattct cagttacacc tcccagtgcc cttctgaaaa
2521 gtgccagcta tttcattagg caatgctgga aggaaatgaa attatacctt ctgatcaaat
2581 aaccatggct tccctcagcc attactgaga cttggtataa aatgaagaaa tcagtgtcat
2641 ctctactctc ctctgccatg aggccatttt cagacaagtt aaaaagtaga ctttaagaga
2701 tcaaactcag cctattcctt gttccctggt ggggtctgtg gtaagggtca gggaagggca
2761 tataggcacc agagctttat ccaaagcccc aaatccctag agtgctttct ggtctcactt
2821 tggtaccaag gaagcctcac atagtggtac tgcatagtcc cactataagt caagttgcag
2881 tttaaggtgg tctcagccaa ttgttacaag ctacagaata tatacatgca tctatgtaca
2941 gagccttgca gagaaacaca aaattttgag gctagaccca tgatcaccac caactataat
3001 tgcacaaggt cttgttatat tgatctctcc tcgaactcaa ctaacgatat cttgaaaaca
3061 aagacccttc ggtgtccatc tacagtaaac cccaccatta ccttctagtt ggcataaaaa
3121 caagaaccac aaaaacttga aaaatctgaa acagagaaca gaaggccaag agcaagcttc
3181 tgcgttctca actttattca acattagact taccttattt ctttcagtgt gtagggacaa
3241 gatgtactgc tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtctata
3301 ccttcctatc cattggcaag ttaacctcca tctggttgat ttggccatgc tatgctttct
3361 tcccattccc ctgctgtcta ttctaagccc ccagactcaa gcctctagac tcttggatga
3421 aacagtgaga agaaaacatt ttctgactta cccttttgga atctcctcca ttattaccca
3481 ggctttgctt taagttgcac tttaaatcac actgtcctat taatgcgatc tggcatcttc
3541 tcccacaagc cccctacagg gaacaactac cccctacctt aactctaaat ggttctttag
3601 actatagtct gtctcctctg acctgaaatc ctcttttagg caataggccg agctttagaa
3661 gcagccaggt ctggtgagaa atgggccccc ataccaactg tggacttgga atatcagcag
3721 agtagtaggc acagttgtaa aaaggggaga tttcggtagg cacaggtgta aaaaggggag
3781 atttcagaag acgggcgaaa caactgatgg gggaagatac ctggggtgag aagatgagaa
3841 agaaatgatg ctgagggacc tagtgaaatc aatgaaactc ttgagtcttg cttaggctcg
3901 caaacaagaa gtggggaggc ttgggaaatt aggatatgac atatatgaaa ggtttatcta
3961 agaagaaaga aacagagata atatatatat agaaagatgt atatagatgt atatatgccc
4021 aaatatattg aatgtacaga aaggaaatat tcagagactt tagcattggg ggcagatatc
4081 ttggcctggt tatggggtag gacacccaga ttttcagact tacaatcagt ggtcctggtt
4141 tcaacatgga agtgagatag ctgatgaagg atttcaagtc tggaaatggg aaagggaggg
4201 gtagaagttc cttttcagaa ataaagaggc attcatgaag gcttttgttg aatcctatgc
4261 tactgatagg accaggaaga gaggaactcg gaggacaata gggaggggaa gtcttggaaa
4321 atctaccact tacactgtgt gtccccatcc ccagcagcgt cctgccactg tagcgccttt
4381 ttaaaataaa taaaataaaa taaagcacca aaaaaaaaaa aaaa
//