LOCUS BC034019 2368 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens LIM domain binding 2, mRNA (cDNA clone MGC:22545
IMAGE:4693654), complete cds.
ACCESSION BC034019
VERSION BC034019.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2368)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2368)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49574520.
FEATURES Location/Qualifiers
source 1..2368
/db_xref="H-InvDB:HIT000042043"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22545 IMAGE:4693654"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2368
/gene="LDB2"
/gene_synonym="CLIM1"
/gene_synonym="LDB1"
/db_xref="GeneID:9079"
/db_xref="HGNC:HGNC:6533"
/db_xref="MIM:603450"
CDS 118..1239
/gene="LDB2"
/gene_synonym="CLIM1"
/gene_synonym="LDB1"
/codon_start=1
/product="LIM domain binding 2"
/protein_id="AAH34019.1"
/db_xref="GeneID:9079"
/db_xref="HGNC:HGNC:6533"
/db_xref="MIM:603450"
/translation="MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTE
DSDNLWWDAFATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYY
ILKHSKESYHNSSITVDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHF
TIRQYRELVPRSILAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMS
RHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTKRRKRKNSTSSTSNSSAGNNA
NSTGSKKKTTAANLSLSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQYDAANGM
DDEEDFNNSPALGNNSPWNSKPPATQETKSENPPPQASQ"
BASE COUNT 717 a 507 c 486 g 658 t
ORIGIN
1 gtgtgtgtgt gagcgtgtgt gcgtgcgtct actttgtact gggaagaaca cagcccatgt
61 gctctgcatg gacgttactg atactctgtt tagcttgatt ttcgaaaagc aggcaagatg
121 tccagcacac cacatgaccc cttctattct tctcctttcg gcccatttta taggaggcat
181 acaccataca tggtacagcc agagtaccga atctatgaga tgaacaagag actgcagtct
241 cgcacagagg atagtgacaa cctctggtgg gacgcctttg ccactgaatt ttttgaagat
301 gacgccacat taaccctttc attttgtttg gaagatggac caaagcgata cactatcggc
361 aggaccctca tcccccgtta ctttagcact gtgtttgaag gaggggtgac cgacctgtat
421 tacattctca aacactcgaa agagtcatac cacaactcat ccatcacggt ggactgcgac
481 cagtgtacca tggtcaccca gcacgggaag cccatgttta ccaaggtatg tacagaaggc
541 agactgatct tggagttcac ctttgatgat ctcatgagaa tcaaaacatg gcactttacc
601 attagacaat accgagagtt agtcccgaga agcatcctag ccatgcatgc acaagatcct
661 caggtcctgg atcagctgtc caaaaacatc accaggatgg ggctaacaaa cttcaccctc
721 aactacctca ggttgtgtgt aatattggag ccaatgcagg aactgatgtc gagacataaa
781 acttacaacc tcagtccccg agactgcctg aagacctgct tgtttcagaa gtggcagagg
841 atggtggctc cgccagcaga acccacaagg caaccaacaa ccaaacggag aaaaaggaaa
901 aattccacca gcagcacttc caacagcagc gctgggaaca atgcaaacag cactggcagc
961 aagaagaaga ccacagctgc aaacctgagt ctgtccagtc aggtacctga tgtgatggtg
1021 gtaggagagc caactctgat gggaggtgag tttggggacg aggacgaaag gctaatcact
1081 agattagaaa acacgcaata tgatgcggcc aacggcatgg acgacgagga ggacttcaac
1141 aattcacccg cgctggggaa caacagcccg tggaacagta aacctcccgc cactcaagag
1201 accaaatcag aaaacccccc accccaggct tcccaataag atgatcggca ccagaatcca
1261 ctgtcaatag gcccgtgggt gatcattaca attgcaaatc tttacttaca ggagaggaaa
1321 cagaagagat aaaaactttt ccatgcaaat atctatttct aaaccacaat gatctgattt
1381 tctttcttct ttcttttttt ctaattgaga ggattattcc cagtaagctt ccatgaccct
1441 ttcttggagg ccttcacagg taatacagat actggcactg attgtaatta aaatgagaga
1501 aaactctagc gcatcttctg gcacggtttt aacaacgtgt ttgtgttgaa tttccttttt
1561 atgcatcaaa cgaaggccat attgtccata aatgctcagt gctcaggatc tcattaatat
1621 gccgaaccta actacagatg actttttaat attgtaaaat attttctgct ttttgacttg
1681 catctgagag tttcttgttt cagtaaaaaa agaaaagaca aaaaaatcag ctttggaaag
1741 taatttaaat gtaccttatt ttttttttct ttatgttttc tttcattggg caacagctaa
1801 gagggcccag caaggtaatt tatggttgag ctgatgtcaa ttggttcttg tcttgagtcg
1861 actcaattta gcccaagtgc tgaaacaaga aatgtcattt ttttcatcaa agacaccagg
1921 gcagattttt aagtaaagaa agacaattgg acccttaaga atttatgcat ttgtaaagtt
1981 gctgttgatc caaatatttt caagccatgt aatccattgg ttttgtgggc agtttaataa
2041 acctgaacct ttgtgtgttt tctaattgta cctgagttga ccatcctttc tttttatagt
2101 atatttcttg tatgatattt tgtaaagctc tcacctggtt cttttatggg gacttttcgt
2161 ttttgggcaa ctccagtgta tttatgtgaa actttataag agaattaatt tttccatttg
2221 catattaata tgttcctcca cacatgtaaa ggcacagtgg ctccgtgtgt taaaaaacag
2281 ctgtatttta tgtatgcttt actgataagt gtgccaataa taaactgtgt taatgatcaa
2341 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//