LOCUS BC033827 1229 bp mRNA linear HUM 11-AUG-2005 DEFINITION Homo sapiens major histocompatibility complex, class II, DR beta 1, mRNA (cDNA clone MGC:45344 IMAGE:5216243), complete cds. ACCESSION BC033827 VERSION BC033827.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1229) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1229) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: p Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 26665892. FEATURES Location/Qualifiers source 1..1229 /db_xref="H-InvDB:HIT000041984" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45344 IMAGE:5216243" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1229 /gene="HLA-DRB1" /gene_synonym="DRB1" /gene_synonym="HLA DRB1" /db_xref="GeneID:3123" /db_xref="MIM:142857" CDS 44..844 /gene="HLA-DRB1" /gene_synonym="DRB1" /gene_synonym="HLA DRB1" /codon_start=1 /product="HLA-DRB1 protein" /protein_id="AAH33827.1" /db_xref="GeneID:3123" /db_xref="MIM:142857" /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALSGDTRPRFLWQPKREC HFFNGTERVRFLDRYFYNQEESVRFDSDVGEFRAVTELGRPDAEYWNSQKDILEQARA AVDTYCRHNYGVVESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRW FLNGQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWR ARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS" BASE COUNT 311 a 313 c 332 g 273 t ORIGIN 1 cttgcctgct tctctggccc ctggtcctgt cctgttctcc agcatggtgt gtctgaagct 61 ccctggaggc tcctgcatga cagcgctgac agtgacactg atggtgctga gctccccact 121 ggctttgtct ggggacaccc gaccacgttt cctgtggcag cctaagaggg agtgtcattt 181 cttcaatggg acggagcggg tgcggttcct ggacagatac ttctataacc aggaggagtc 241 cgtgcgcttc gacagcgacg tgggggagtt ccgggcggtg acggagctgg ggcggcctga 301 cgctgagtac tggaacagcc agaaggacat cctggagcag gcgcgggccg cggtggacac 361 ctactgcaga cacaactacg gggttgtgga gagcttcaca gtgcagcggc gagtccaacc 421 taaggtgact gtatatcctt caaagaccca gcccctgcag caccacaacc tcctggtctg 481 ctctgtgagt ggtttctatc caggcagcat tgaagtcagg tggttcctga acggccagga 541 agagaaggct gggatggtgt ccacaggcct gatccagaat ggagactgga ccttccagac 601 cctggtgatg ctggaaacag ttcctcgaag tggagaggtt tacacctgcc aagtggagca 661 cccaagcgtg acaagccctc tcacagtgga atggagagca cggtctgaat ctgcacagag 721 caagatgctg agtggagtcg ggggctttgt gctgggcctg ctcttccttg gggccgggct 781 gttcatctac ttcaggaatc agaaaggaca ctctggactt cagccaacag gattcctgag 841 ctgaaatgca gatgaccaca ttcaaggaag aactttctgc cccggctttg caggatgaaa 901 agctttcctg cttggcagtt attcttccac aagagagggc tttctcagga cctggttgct 961 actggttcgg caactgcaga aaatgtcctc ccttgtggct tcctcagctc ctgcccttgg 1021 cctgaagtcc cagcattgat ggcagcgcct catcttcaac ttttgtgctc ccctttgcct 1081 aaaccgtatg gcctcccgtg catctgtatt caccctgtat gacaaacaca ttacattatt 1141 aaatgtttct caaagatgga gttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //