LOCUS BC033819 1680 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens cell adhesion molecule 3, mRNA (cDNA clone MGC:45003
IMAGE:5199627), complete cds.
ACCESSION BC033819
VERSION BC033819.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1680)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1680)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: n Column: 23.
FEATURES Location/Qualifiers
source 1..1680
/db_xref="H-InvDB:HIT000041977"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45003 IMAGE:5199627"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1680
/gene="CADM3"
/gene_synonym="BIgR"
/gene_synonym="Necl-1"
/gene_synonym="NECL1"
/gene_synonym="synCAM3"
/gene_synonym="TSLL1"
/db_xref="GeneID:57863"
/db_xref="HGNC:HGNC:17601"
/db_xref="IMGT/GENE-DB:IGSF4B"
/db_xref="MIM:609743"
CDS 91..1287
/gene="CADM3"
/gene_synonym="BIgR"
/gene_synonym="Necl-1"
/gene_synonym="NECL1"
/gene_synonym="synCAM3"
/gene_synonym="TSLL1"
/codon_start=1
/product="CADM3 protein"
/protein_id="AAH33819.1"
/db_xref="GeneID:57863"
/db_xref="HGNC:HGNC:17601"
/db_xref="IMGT/GENE-DB:IGSF4B"
/db_xref="MIM:609743"
/translation="MGAPAASLLLLLLLFACCWAPGGANLSQDDSQPWTSDETVVAGG
TVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVAL
ADEGEYTCSIFTMPVRTAKSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPA
ARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHESLKG
ADRSTSQRIEVLYTPTAMIRPDPPHPREGQKLLLHCEGRGNPVPQQYLWEKEGSVPPL
KMTQESALIFPFLNKSDSGTYGCTATSNMGSYKAYYTLNVNDPSPVPSSSSTYHAIIG
GIVAFIVFLLLIMLIFLGHYLIRHKGTYLTHEAKGSDDAPDADTAIINAEGGQSGGDD
KKEYFI"
BASE COUNT 427 a 509 c 431 g 313 t
ORIGIN
1 gtcaacatcg tagtccaccc cctccccatc cccagccccc ggggattcag gctcgccagc
61 gcccagccag ggagccggcc gggaagcgcg atgggggccc cagccgcctc gctcctgctc
121 ctgctcctgc tgttcgcctg ctgctgggcg cccggcgggg ccaacctctc ccaggacgac
181 agccagccct ggacatctga tgaaacagtg gtggctggtg gcaccgtggt gctcaagtgc
241 caagtgaaag atcacgagga ctcatccctg caatggtcta accctgctca gcagactctc
301 tactttgggg agaagagagc ccttcgagat aatcgaattc agctggttac ctctacgccc
361 cacgagctca gcatcagcat cagcaatgtg gccctggcag acgagggcga gtacacctgc
421 tcaatcttca ctatgcctgt gcgaactgcc aagtccctcg tcactgtgct aggaattcca
481 cagaagccca tcatcactgg ttataaatct tcattacggg aaaaagacac agccacccta
541 aactgtcagt cttctgggag caagcctgca gcccggctca cctggagaaa gggtgaccaa
601 gaactccacg gagaaccaac ccgcatacag gaagatccca atggtaaaac cttcactgtc
661 agcagctcgg tgacattcca ggttacccgg gaggatgatg gggcgagcat cgtgtgctct
721 gtgaaccatg aatctctaaa gggagctgac agatccacct ctcaacgcat tgaagtttta
781 tacacaccaa ctgcgatgat taggccagac cctccccatc ctcgtgaggg ccagaagctg
841 ttgctacact gtgagggtcg cggcaatcca gtcccccagc agtacctatg ggagaaggag
901 ggcagtgtgc cacccctgaa gatgacccag gagagtgccc tgatcttccc tttcctcaac
961 aagagtgaca gtggcaccta cggctgcaca gccaccagca acatgggcag ctacaaggcc
1021 tactacaccc tcaatgttaa tgaccccagt ccggtgccct cctcctccag cacctaccac
1081 gccatcatcg gtgggatcgt ggctttcatt gtcttcctgc tgctcatcat gctcatcttc
1141 ctcggccact acttgatccg gcacaaagga acctacctga cacatgaggc aaaaggctcc
1201 gacgatgctc cagacgcgga cacggccatc atcaatgcag aaggcgggca gtcaggaggg
1261 gacgacaaga aggaatattt catctagagg cgcctgccca cttcctgcgc cccccagggg
1321 ccctgtgggg actgctgggg ccgtcaccaa cccggacttg tacagagcaa ccgcagggcc
1381 gcccctcccg cttgctcccc agcccaccca cccccctgta cagaatgtct gctttgggtg
1441 cggttttgta ctcggtttgg aatggggagg gaggagggcg gggggagggg agggttgccc
1501 tcagcccttt ccgtggcttc tctgcatttg ggttattatt atttttgtaa caatcccaaa
1561 gcaaatctgt ctccaggctg gagaggcagg agccctgggg tgagaaaagc aaaaaacaaa
1621 caaaaaacaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//