LOCUS BC033799 2610 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens host cell factor C2, mRNA (cDNA clone MGC:45151
IMAGE:5172046), complete cds.
ACCESSION BC033799
VERSION BC033799.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2610)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2610)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: j Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7019404.
FEATURES Location/Qualifiers
source 1..2610
/db_xref="H-InvDB:HIT000041963"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45151 IMAGE:5172046"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2610
/gene="HCFC2"
/gene_synonym="HCF-2"
/gene_synonym="HCF2"
/db_xref="GeneID:29915"
/db_xref="HGNC:HGNC:24972"
/db_xref="MIM:607926"
CDS 6..2384
/gene="HCFC2"
/gene_synonym="HCF-2"
/gene_synonym="HCF2"
/codon_start=1
/product="host cell factor C2"
/protein_id="AAH33799.1"
/db_xref="GeneID:29915"
/db_xref="HGNC:HGNC:24972"
/db_xref="MIM:607926"
/translation="MAAPSLLNWRRVSSFTGPVPRARHGHRAVAIRELMIIFGGGNEG
IADELHVYNTATNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYE
LQASRWLWKKVKPHPPPSGLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYL
NDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTAVIYCKKDSGSPKMYVFGGMCGAR
LDDLWQLDLETMSWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPH
DCEWRCTSSFSYLNLDTTEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRD
GYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEVSTVEGYLLQLST
DLPYQAASSDSSAAPNMQGVRMDPHRQGSNNIVPNSINDTINSTKTEQPATKETSMKN
KPDFKALTDSNAILYPSLASNASNHNSHVVDMLRKNEGPHTSANVGVLSSCLDVRTVI
PETSVSSTVSSTQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETYALPATK
ISRVETHATATPFSKETPSNPVATVKAGERQWCDVGIFKNNTALVSQFYLLPKGKQSI
SKVGNADVPDYSLLKKQDLVPGTGYRFRVAAINGCGIGPFSKISEFKTCIPGFPGAPS
AVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQIQDNPSQLVFMRIYCGLKTS
CIVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQVRWLQGNNKKAPLN"
BASE COUNT 826 a 515 c 574 g 695 t
ORIGIN
1 ggaagatggc ggctcccagc ctcctcaact ggaggcgagt ttcttccttc acggggccgg
61 tcccccgcgc ccggcacgga caccgagcgg tggccatccg ggagctgatg atcatctttg
121 gagggggaaa tgagggcatc gcggatgagc tgcacgtcta caacacggct acgaatcagt
181 ggtttctgcc agctgttaga ggagatatcc ctccaggctg tgctgcccat ggatttgtct
241 gtgatggtac cagaatatta gtatttgggg gaatggttga atatggaaga tacagcaatg
301 agttatatga gttacaagca agtcgttggt tatggaaaaa agtgaaaccc catccccctc
361 cttctggttt acctccttgt cctcggcttg gacatagctt ctctttatat ggtaacaaat
421 gctatttgtt tggtggcctg gcaaacgaaa gcgaagattc aaacaataat gttcccagat
481 atttaaatga tttttatgag ttggagctac agcatggctc tggtgttgtg ggttggagca
541 ttccagtgac taaaggggtt gtgccttctc caagagaatc ccacacagct gttatatatt
601 gcaaaaaaga ttctggaagt cctaaaatgt atgtttttgg tggaatgtgt ggtgctcgcc
661 tggatgacct atggcagctt gacttagaaa ctatgtcatg gtcaaaacca gaaactaaag
721 ggacagtgcc acttccacga agccttcata cagccagtgt tataggaaac aagatgtaca
781 tttttggtgg atgggtccca cataaggggg aaaatactga gacttcacct catgattgtg
841 aatggagatg taccagttca ttttcttacc taaatctgga tacaacagag tggaccaccc
901 tagtatcaga ttctcaggaa gataaaaaaa attcaagacc aagaccaaga gctggccact
961 gtgctgttgc aatcggcact cgattgtatt tttggagtgg aagagatggc tacaaaaaag
1021 cactgaatag tcaagtttgc tgcaaggatc tttggtatct tgatactgag aaaccaccgg
1081 caccatctca agtacagctg atcaaagcca ctaccaactc ctttcatgtc aagtgggatg
1141 aagtgtctac agttgagggc tatcttttgc agttgagtac agacttgcca taccaagctg
1201 catcatcaga ttcttcagca gcaccaaata tgcaaggagt caggatggac cctcacagac
1261 aaggcagtaa taacatcgtt cctaacagta tcaatgatac aataaacagc acaaaaactg
1321 aacagccagc cacaaaagaa acttcaatga aaaacaaacc agactttaaa gcactgacgg
1381 attctaatgc cattttatat ccatctttgg catcaaatgc ttctaatcat aatagtcatg
1441 tggtggatat gctaaggaaa aatgaaggtc ctcacacttc agcaaatgta ggtgttctaa
1501 gtagttgcct ggatgtaaga acagtaattc ctgaaacatc tgtatccagt actgtttcca
1561 gcacacaaac tatggtaacc cagcagacca ttaaaactga atcatccagt acaaatgggg
1621 cagttgttaa agatgaaact tcactaacaa cattcagtac caaatctgaa gttgatgaaa
1681 catatgcact gcctgcaacg aagatcagcc gtgtagagac acatgctaca gcaacgccgt
1741 tttctaaaga gactccttca aatccagtgg ccacagtgaa agcgggagaa cgacaatggt
1801 gtgatgtggg aatttttaaa aataatacag ctttggtgag ccagttttat ttgctgccaa
1861 aagggaagca aagcatctca aaggtaggaa atgcagatgt acctgactac agcttgctta
1921 agaaacaaga tcttgttcca ggcacaggat acagattcag ggttgctgca atcaatggtt
1981 gtgggatagg tcctttcagc aaaatcagtg aatttaaaac ttgtattcct ggttttcctg
2041 gagctccttc tgcagtcaga atttcaaaga atgttgaagg tatccacctt tcctgggaac
2101 ctccaacctc accttctgga aatattttgg aatattcagc ctacttggct atccgcacag
2161 cacagataca agataatcca agtcaacttg tgttcatgag gatttattgt ggtcttaaga
2221 catcatgtat agtaactgct gggcaacttg caaatgcaca tattgattat acatccaggc
2281 ctgccattgt gttcaggata tcagcaaaga atgaaaaggg atatggacca gctacacaag
2341 ttcggtggct tcaaggtaac aataagaaag cacctttaaa ttgaattggt ttttttactg
2401 aagctattgt gatgatgatt atttattagt aactggttat gaagatttgt catttaaaag
2461 agtattctct ggctgtattt ccagcagtta tgaacttgag tttgtaaatt gttcttaaaa
2521 tgtatttgct gaattataga tccaaataaa agaaaagaag caaagactct ctgaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//