LOCUS BC033794 1064 bp mRNA linear HUM 10-JUL-2017
DEFINITION Homo sapiens HD domain containing 3, mRNA (cDNA clone MGC:45386
IMAGE:5122164), complete cds.
ACCESSION BC033794
VERSION BC033794.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1064)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1064)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 1064)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2017) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Jul 10, 2017 this sequence version replaced BC033794.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: h Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38348359.
FEATURES Location/Qualifiers
source 1..1064
/db_xref="H-InvDB:HIT000041959"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45386 IMAGE:5122164"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1064
/gene="HDDC3"
/gene_synonym="MGC45386"
/db_xref="GeneID:374659"
/db_xref="HGNC:HGNC:30522"
CDS 5..427
/gene="HDDC3"
/gene_synonym="MGC45386"
/codon_start=1
/product="HD domain containing 3"
/protein_id="AAH33794.1"
/db_xref="GeneID:374659"
/db_xref="HGNC:HGNC:30522"
/translation="MGSEAAQLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILT
HEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKR
LQVEQAPHSSPGAKLVKLADKLYNLRDLNRCTPEVKIQ"
BASE COUNT 274 a 275 c 299 g 216 t
ORIGIN
1 cgcgatgggc tctgaggcgg cgcagctgct ggaggctgcc gacttcgcgg ctcgcaagca
61 ccggcagcag cggcggaagg accccgaggg gaccccctac atcaaccacc ccatcggtgt
121 ggcacggatc ctgacccacg aggcgggaat cactgacatt gtggtgttac aggcggccct
181 gctccatgac acggtggagg acacagacac caccctggat gaggtggagc tacactttgg
241 ggcacaagtg cggcgcctgg tggaggaggt aacagatgac aagactctgc ccaagctgga
301 gagaaagagg ctgcaggtgg agcaagcgcc ccacagtagc cccggggcca aactggtgaa
361 gctggcagac aagctgtaca atctgaggga cctgaatcgc tgcaccccag aggtaaaaat
421 acaatagctg ggccaagggg aagttttcag gacagctcat tgcatcagga actcatggcc
481 ttgaaccaag cttgccagga agtggggaaa aggcagtgct ttccttgaca tcacgctagc
541 aagtttctgt cgactcttat gcaggatggt cagaacatcg agtccaggaa tacttcgagt
601 gggcagcgca ggtggtgaag gggcttcagg gaacaaaccg gcaactggaa gaggctctaa
661 agcatctgtt caagcagcgg gggctgacaa tctgatcagt gcttgaagct atccagaggc
721 acaactccag cctcgttcag gccggacagg attcatacgc catcttttct gtgtctcctg
781 agctccctcc atccttccca gatattagag gccaaaaaaa gacttgcatt ttttctcagt
841 ctgaaggtct cctgctaact aagctgagcc ccgcgtggtg ggaatcagat gtacccatcc
901 atttctgatg cactcaccgc ctctccccaa gtcttgggtc tgtttgctat tttgcatggt
961 ggggtctctg gcccctcagg gacttgagat tatttaagta ctagttccta acacgttctg
1021 gaaaataaaa ataactctgg gttaaaaaaa aaaaaaaaaa aaaa
//