LOCUS BC033790 1980 bp mRNA linear HUM 13-JUN-2005
DEFINITION Homo sapiens chromosome 1 open reading frame 92, mRNA (cDNA clone
MGC:45468 IMAGE:5163973), complete cds.
ACCESSION BC033790
VERSION BC033790.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1980)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1980)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: h Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..1980
/db_xref="H-InvDB:HIT000041956"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45468 IMAGE:5163973"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1980
/gene="C1orf92"
/gene_synonym="FLJ32884"
/db_xref="GeneID:149499"
CDS 155..1834
/gene="C1orf92"
/gene_synonym="FLJ32884"
/codon_start=1
/product="C1orf92 protein"
/protein_id="AAH33790.1"
/db_xref="GeneID:149499"
/translation="MSSEQSAPGASPRAPRPGTQKSSGAVTKKGERAAKEKPATVLPP
VGEEEPKSPEEYQCSGVLETDFAELCTRWGYTDFPKVVNRPRPHPPFVPSASLSEKAT
LDDPRLSGSCSLNSLESKYVFFRPTIQVELEQEDSKSVKEIYIRGWKVEERILGVFSK
CLPPLTQLQAINLWKVGLTDKTLTTFIELLPLCSSTLRKVSLEGNPLPEQSYHKLMAL
DSTIAHLSLRNNNIDDRGAQLLGQALSTLHSCNRTLVSLNLGFNHIGDEGAGYIADGL
RLNRSLLWLSLAHNRIQDKGALKLAEVLRAFELTHTEVVERRRLLLEKGTQERSRSPS
SSRHGDSKTDREKSQMVGISNSALVDKTDKTQTMKTPKGLGKKKEKSWELAKKEEKLG
SGQSPTQGTPKKEDATKAGKGKVTIPEQKPSRAKGIKIGSREKRSILLESELVVEATE
VVNPLLEPVEHRDGKVFMPGNKVLLHLNLIRNRITEVGLEGFLATVQYQMQFSKAKSA
SKGPVGLLWLSLAKNCFAPQCPAYAIIQELMLPRDPIKAKLREDEAMAFFP"
BASE COUNT 477 a 596 c 575 g 332 t
ORIGIN
1 gcgtaggcta cgccaccgcg gacgggtcgg atccggtccc tggacgcgga acagagatcc
61 cctgattcag ccatccccag actgagcccc gtagagtgcg ttcttacctt cctgccccga
121 cgaaggtccc agagacgctg cggacaacac cagcatgtcg agcgagcaga gcgcgccggg
181 ggcctcaccc agggccccgc gtccggggac ccagaagtct tctggcgcgg tgaccaaaaa
241 gggagagcgc gcggccaaag agaagccagc gaccgttctg cctcccgtgg gggaggagga
301 gcccaaaagc cctgaggagt accagtgctc cggggtcctc gagaccgact tcgccgagct
361 ctgcacgcgg tggggctaca cggacttccc caaagttgtc aaccggcccc gcccccaccc
421 gcccttcgtc ccctccgcct ctttgtcgga aaaggccacc ttagacgatc cgcggctgtc
481 ggggtcctgc agcctcaata gcctggagag caaatacgtg ttcttccggc ccaccatcca
541 ggtggagctg gagcaggagg acagcaagtc agtgaaggaa atctacatcc gcggttggaa
601 ggttgaggaa cggattctgg gtgtcttctc taaatgtctg cccccgctta cccagctaca
661 ggccatcaac ttgtggaagg tggggctgac cgataagacc ctgaccacct tcatcgagct
721 cctgcctctc tgttcatcca cgctcaggaa ggtgtctctg gaggggaacc cactgccgga
781 gcagtcctat cacaagctca tggccttgga cagcacgatt gcgcacttgt ctctgcggaa
841 caataacatc gacgaccgcg gggcgcaact cctgggccag gcgctgtcca cgctgcacag
901 ctgcaaccgg accctcgtct cgctcaacct gggtttcaac cacatcggtg acgagggcgc
961 aggctacatc gcggacggcc tccggctgaa ccgttccctg ctctggctgt ccctggccca
1021 caaccgcatc caggacaagg gcgccctgaa gctggctgag gtcctgcgcg ccttcgagct
1081 gacacacacc gaagtggtgg agcgccgacg cctcctgctg gaaaaaggga cacaggagcg
1141 ctcgcgatcg ccctcctcct ctcgacacgg ggactccaaa acggaccgtg agaagagtca
1201 gatggtaggg atcagcaata gtgcattggt ggacaagaca gacaagacgc agacaatgaa
1261 aacccctaag ggcctgggca agaaaaagga gaaatcatgg gaattggcca agaaagagga
1321 gaagttgggg tctgggcagt cacccacaca aggaacccct aagaaggaag atgccacaaa
1381 ggcaggcaag gggaaggtaa ccatccctga acagaagcca agcagggcaa aagggatcaa
1441 gatcgggagc agagagaagc gcagcatcct cctggagtcc gagctggttg ttgaggctac
1501 tgaggtggtc aaccctctcc tggagcctgt ggagcaccga gatgggaaag ttttcatgcc
1561 tgggaacaag gtccttttgc acctcaacct catccggaac cgcatcacag aggtggggct
1621 ggagggcttc ctcgccacag tgcagtatca gatgcagttc tccaaggcca agagtgcatc
1681 caagggtcca gtggggctgc tgtggctgtc cctggctaaa aattgcttcg ccccacaatg
1741 tcctgcgtac gccataatcc aggagctgat gttgccaagg gatcccatca aggccaaact
1801 cagggaggat gaggccatgg cattcttccc ctagccccct cccacctgct tgcctctaag
1861 actcggggct acagaagcac ctcctgtccc tgtgtggggt gacctccctg ggggagatct
1921 cagaccaata acaaagtctg ttgctataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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