LOCUS BC033781 2969 bp mRNA linear HUM 19-APR-2005 DEFINITION Homo sapiens PAX interacting (with transcription-activation domain) protein 1, mRNA (cDNA clone MGC:45592 IMAGE:4509264), complete cds. ACCESSION BC033781 VERSION BC033781.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2969) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2969) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: f Column: 13. FEATURES Location/Qualifiers source 1..2969 /db_xref="H-InvDB:HIT000041951" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45592 IMAGE:4509264" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2969 /gene="PAXIP1" /gene_synonym="CAGF28" /gene_synonym="CAGF29" /gene_synonym="PAXIP1L" /gene_synonym="PTIP" /gene_synonym="TNRC2" /db_xref="GeneID:22976" /db_xref="MIM:608254" CDS 221..2494 /gene="PAXIP1" /gene_synonym="CAGF28" /gene_synonym="CAGF29" /gene_synonym="PAXIP1L" /gene_synonym="PTIP" /gene_synonym="TNRC2" /codon_start=1 /product="PAXIP1 protein" /protein_id="AAH33781.1" /db_xref="GeneID:22976" /db_xref="MIM:608254" /translation="MAAGQNLQSSERSEMIATWSPAVRTLRNITNNADIQQMNRPSNV AHILQTLSAPTKNLEQQVNHSQQGHTNANAVLFSQVKVTPETHMLQQQQQAQQQQQQH PVLHLQPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQ QQLHPPQQLHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQ QIQQQQLQRMHQQQQQQQMQSQTAPHLSQTSQALQHQVPPQQPPQQQQQQQPPPSPQQ HQLFGHDPAVEIPEEGFLLGCVFAIADYPEQMSDKQLLATWKRIIQAHGGTVDPTFTS RCTHLLCESQVSSAYAQAIRERKRCVTAHWLNTVLKKKKMVPPHRALHFPVAFPPGGK PCSQHIISVTGFVDSDRDDLKLMAYLAGAKYTGYLCRSNTVLICKEPTGLKYEKAKEW RIPCVNAQWLGDILLGNFEALRQIQYSRYTAFSLQDPFAPTQHLVLNLLDAWRVPLKV SAELLMSIRLPPKLKQNEVANVQPSSKRARIEDVPPPTKKLTPELTPFVLFTGFEPVQ VQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRC QKFIDEQNYILRDAEAEVLFSFSLEESLKRAHVSPLFKAKYFYITPGICPSLSTMKAI VECAGGKVLSKQPSFRKLMEHKQNSSLSEIILISCENDLHLCREYFARGIDVHNAEFV LTGVLTQTLDYESYKFN" BASE COUNT 854 a 731 c 663 g 721 t ORIGIN 1 ccacgcgtcc gctaaagggg aattaatgtt tgatgattct tcagattcat caccggaaaa 61 acaggagaga aatttaaact ggaccccggc cgaagtccca cagttagctg cagcaaaacg 121 caggctgcct cagggaaagg agcctgggtt gattaacttg tgtgccaatg tcccacccgt 181 cccaggtaac attttgcccc ctgaggtccg gggtaattta atggctgctg gacaaaacct 241 ccaaagttct gaaagatcag aaatgatagc tacctggagt ccagctgtac ggacactgag 301 gaatattact aataatgctg acattcagca gatgaaccgg ccatcaaatg tagcacatat 361 cttacagact ctttcagcac ctacgaaaaa tttagaacag caggtgaatc acagccagca 421 gggacataca aatgccaatg cagtgctgtt tagccaagtg aaagtgactc cagagacaca 481 catgctacag cagcagcagc aggcccagca gcagcagcag cagcacccgg ttttacacct 541 tcagccccag cagataatgc agctccagca gcagcagcag cagcagatct ctcagcaacc 601 ttacccccag cagccgccgc atccattttc acagcaacag cagcagcagc agcaagccca 661 tccgcatcag ttttcacagc aacagctaca gtttccacag caacagttgc atcctccaca 721 gcagctgcat cgccctcagc agcagctcca gccctttcag cagcagcatg ccctgcagca 781 gcagttccat cagctgcagc agcaccagct ccagcagcag cagctcgccc agctccagca 841 gcagcacagc ctgctccagc agcagcagca acagcagatt cagcagcagc agctccagcg 901 catgcaccag cagcagcagc agcagcagat gcaaagtcag acagcgccac acttgagtca 961 gacgtcacag gcgctgcagc atcaggttcc acctcagcag cccccgcagc agcagcagca 1021 acagcagcca ccaccatcgc ctcagcagca tcagcttttt ggacatgatc cagcagtgga 1081 gattccagaa gaaggcttct tattgggatg tgtgtttgca attgcggatt atccagagca 1141 gatgtctgat aagcaactgc tggccacctg gaaaaggata atccaggcac atggcggcac 1201 tgttgacccc accttcacga gtcgatgcac gcaccttctc tgtgagagtc aagtcagcag 1261 cgcgtatgca caggcaataa gagaaagaaa gagatgtgtt actgcacact ggttaaacac 1321 agtcttaaag aagaagaaaa tggtaccgcc gcaccgagcc cttcacttcc cagtggcctt 1381 cccaccagga ggaaagccat gttcacagca tattatttct gtgactggat ttgttgatag 1441 tgacagagat gacctaaaat taatggctta tttggcaggt gccaaatata cgggttatct 1501 atgccgcagc aacacagtcc tcatctgtaa agaaccaact ggtttaaagt atgaaaaagc 1561 caaagagtgg aggataccct gtgtcaacgc ccagtggctt ggcgacattc ttctgggaaa 1621 ctttgaggca ctgaggcaga ttcagtatag tcgctacacg gcattcagtc tgcaggatcc 1681 atttgcccct acccagcatt tagttttaaa tcttttagat gcttggagag ttcccttaaa 1741 agtgtctgca gagttgttga tgagtataag actacctccc aaactgaaac agaatgaagt 1801 agctaatgtc cagccttctt ccaaaagagc cagaattgaa gacgtaccac ctcccactaa 1861 aaagctaact ccagaattga ccccttttgt gcttttcact ggattcgagc ctgtccaggt 1921 tcaacagtat attaagaagc tctacattct tggtggagag gttgcggagt ctgcacagaa 1981 gtgcacacac ctcattgcca gcaaagtgac tcgcaccgtg aagttcctga cggcgatttc 2041 tgtcgtgaag cacatagtga cgccagagtg gctggaagaa tgcttcaggt gtcagaagtt 2101 cattgatgag cagaactaca ttctccgaga tgctgaggca gaagtacttt tctctttcag 2161 cttggaagaa tccttaaaac gggcacacgt ttctccactc tttaaggcaa aatattttta 2221 catcacacct ggaatctgcc caagtctttc cactatgaag gcaatcgtag agtgtgcagg 2281 aggaaaggtg ttatccaagc agccatcttt ccggaagctc atggagcaca agcagaactc 2341 gagtttgtcg gaaataattt taatatcctg tgaaaatgac cttcatttat gccgagaata 2401 ttttgccaga ggcatagatg ttcacaatgc agagttcgtt ctgactggag tgctcactca 2461 aacgctggac tatgaatcat ataagtttaa ctgatggcgt ctaggctgcc gtgcatgtcg 2521 actcctgcgg tgcggggctg gctgtctggc tggcgaggag ctgctgcgct tccttcacat 2581 gctcttgttt tccagctgct ttcctggggg atcagactgt gaagcaggaa gacagatata 2641 ataaatatac tgcatctttt taagatgtgc aattttattc tgaggaaaca taaattatgt 2701 tttgtattat atgactttaa gagcccacat taggttttat gattcatttg ccaggttttt 2761 aaatgttttc acaaaactgt tacgggactt caactagaaa taaaatggtg taaataaaga 2821 ccttgctatc tctaaattat ggatgttaaa gatttgaaat gttttgtact ttgattattt 2881 ttatttctta tactctgttt tcttttatat tgatatcttg cccacatttt aaataaatgt 2941 acttttgaac ttaaaaaaaa aaaaaaaaa //