LOCUS BC033755 3139 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens CD6 molecule, mRNA (cDNA clone MGC:45196
IMAGE:5213263), complete cds.
ACCESSION BC033755
VERSION BC033755.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3139)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3139)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51036597.
FEATURES Location/Qualifiers
source 1..3139
/db_xref="H-InvDB:HIT000041938"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45196 IMAGE:5213263"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3139
/gene="CD6"
/gene_synonym="TP120"
/db_xref="GeneID:923"
/db_xref="HGNC:HGNC:1691"
/db_xref="MIM:186720"
CDS 142..2061
/gene="CD6"
/gene_synonym="TP120"
/codon_start=1
/product="CD6 protein"
/protein_id="AAH33755.1"
/db_xref="GeneID:923"
/db_xref="HGNC:HGNC:1691"
/db_xref="MIM:186720"
/translation="MWLFFGITGLLTAALSGHPSPAPPDQLNTSSAESELWEPGERLP
VRLTNGSSSCSGTVEVRLEASWEPACGALWDSRAAEAVCRALGCGGAEAASQLAPPTP
ELPPPPAAGNTSVAANATLAGAPALLCSGAEWRLCEVVEHACRSDGRRARVTCAENRA
LRLVDGGGACAGRVEMLEHGEWGSVCDDTWDLEDAHVVCRQLGCGWAVQALPGLHFTP
GRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGAVCSEHQSWRLTGGADRCEG
QVEVHFRGVWNTVCDSEWYPSEAKVLCQSLGCGTAVERPKGLPHSLSGRMYYSCNGEE
LTLSNCSWRFNNSNLCSQSLAARVLCSASRSLHNLSTPEVPASVQTVTIESSVTVKIE
NKESRELMLLIPSIVLGILLLGSLIFIAFILLRIKGKYALPVMVNHQHLPTTIPAGSN
SYQPVPITIPKEVFMLPIQVQAPPPEDSDSGSDSDYEHYDFSAQPPVALTTFYNSQRH
RVTDEEVQQSRFQMPPLEEGLEELHASHIPTANPGHCITDPPSLGPQYHPRSNSESST
SSGEDYCNSPKSKLPPWNPQVFSSERSSFLEQPPNLELAGTQPAFSGPPADDSSSTSS
GEWYQNFQPRLLGWL"
BASE COUNT 665 a 983 c 927 g 564 t
ORIGIN
1 cagagagaga cacaggaaca agaacagcaa agggtagagc agacctgcgc caggggcgca
61 caacggccgt gtccacctcc cggccccaag atggtgcttc ccacaggcag ccacgcgtag
121 cagccagaga cagctccaga catgtggctc ttcttcggga tcactggatt gctgacggca
181 gccctctcag gtcatccatc tccagcccca cctgaccagc tcaacaccag cagtgcagag
241 agtgagctct gggagccagg ggagcggctt ccggtccgtc tgacaaacgg gagcagcagc
301 tgcagcggga cggtggaggt gcggctcgag gcgtcctggg agcccgcgtg cggggcgctc
361 tgggacagcc gcgccgccga ggccgtgtgc cgagcactgg gctgcggcgg ggcggaggcc
421 gcctctcagc tcgccccgcc gacccctgag ctgccgcccc cgcctgcagc cgggaacacc
481 agcgtagcag ctaatgccac tctggccggg gcgcccgccc tcctgtgcag cggcgccgag
541 tggcggctct gcgaggtggt ggagcacgcg tgccgcagcg acgggaggcg ggcccgtgtc
601 acctgtgcag agaaccgcgc gctgcgcctg gtggacggtg gcggcgcctg cgccggccgc
661 gtggagatgc tggagcatgg cgagtgggga tcagtgtgcg atgacacttg ggacctggag
721 gacgcccacg tggtgtgcag gcaactgggc tgcggctggg cagtccaggc cctgcccggc
781 ttgcacttca cgcccggccg cgggcctatc caccgggacc aggtgaactg ctcgggggcc
841 gaagcttacc tgtgggactg cccggggctg ccaggacagc actactgcgg ccacaaagag
901 gacgcgggcg cggtgtgctc agagcaccag tcctggcgcc tgacaggggg cgctgaccgc
961 tgcgaggggc aggtggaggt acacttccga ggggtctgga acacagtgtg tgacagtgag
1021 tggtacccat cggaggccaa ggtgctctgc cagtccttgg gctgtggaac tgcggttgag
1081 aggcccaagg ggctgcccca ctccttgtcc ggcaggatgt actactcatg caatggggag
1141 gagctcaccc tctccaactg ctcctggcgg ttcaacaact ccaacctctg cagccagtcg
1201 ctggcagcca gggtcctctg ctcagcttcc cggagtttgc acaatctgtc cactcccgaa
1261 gtccctgcaa gtgttcagac agtcactata gaatcttctg tgacagtgaa aatagagaac
1321 aaggaatctc gggagctaat gctcctcatc ccctccatcg ttctgggaat tctcctcctt
1381 ggctccctca tcttcatagc cttcatcctc ttgagaatta aaggaaaata tgccctcccc
1441 gtaatggtga accaccagca cctacccacc accatcccgg cagggagcaa tagctatcaa
1501 ccggtcccca tcaccatccc caaagaagtt ttcatgctgc ccatccaggt ccaggccccg
1561 ccccctgagg actcagactc tggctcggac tcagactatg agcactatga cttcagcgcc
1621 cagcctcctg tggccctgac caccttctac aattcccagc ggcatcgggt cacagatgag
1681 gaggtccagc aaagcaggtt ccagatgcca cccttggagg aaggacttga agagttgcat
1741 gcctcccaca tcccaactgc caaccctgga cactgcatta cagacccgcc atccctgggc
1801 cctcagtatc acccgaggag caacagtgag tcgagcacct cttcagggga ggattactgc
1861 aatagtccca aaagcaagct gcctccatgg aacccccagg tgttttcttc agagaggagt
1921 tccttcctgg agcagccccc aaacttggag ctggccggca cccagccagc cttttcaggg
1981 cccccggctg atgacagctc cagcacctca tccggggagt ggtaccagaa cttccagccg
2041 aggctcctgg ggtggctctg accctctggc ctcctgctct acctactccc tttccccttt
2101 cccaccctcc cagctcacct ccccatggag ctgagaggcc tcccttggag agatggaagg
2161 aaacgttata ccttgtaccc ctcggtctcc atccatcaag ccaaacctgc tgccacagcc
2221 ctcccccggc cccagatagc agccccaggg aggatgctgc ctccaagagg tgtgagccct
2281 ctgtctcggg gatgaacaag cagagtctgg gctacctctt gacagctggt ggaggggagt
2341 tggggagctg gactggatga ctctggaggc cccttccaaa cctcaagtgt ccggcgcttt
2401 gattgcctga gtttctgaca cttcagggcc cagaggtcct gcgaggggca gaactggacc
2461 cccatgccag tgctgctgca ggagggccca tatactaggg tctgctgagc tgttgtcact
2521 gatcggtggg cgctgggggg gtagggtagc acaccagctg tcccaggctt tgctccgggc
2581 ggtaactgca cttgggcagg gaatatagcc ttcctgggca caactagctg acaatgacag
2641 gttgactgtg tacccccaac caaggagctg gggcccaagg ccagtcctgc cccagagaca
2701 ctccaagtcc gccaggggca cagaccagtt ctgcagtgac tgtccctgga caatgggtct
2761 ttattctgag tttcctatgg tttacaaaga gggccccagc ccagccccac cacagatccc
2821 agagataggg gcccagtctc catgggggca aggagcatag agatgttttc caggaagggg
2881 ctcagaagct gcactaggcc ccgagtcccc atgtgtctcc ttgaattgat gaggatgctc
2941 ctgggaggga tgcgtgacta tgtggtgttg cacccggggc tgcaaacgtc tccgtgcagc
3001 ccccagagag aggcccatgg gctcagacca ggctttgttg tcctgctctg agtatcctga
3061 gattaaactg aattgctgaa tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3121 aaaaaaaaaa aaaaaaaaa
//