LOCUS BC033736 1735 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dermatopontin, mRNA (cDNA clone MGC:45278
IMAGE:5176855), complete cds.
ACCESSION BC033736
VERSION BC033736.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1735)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1735)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: k Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32307171.
FEATURES Location/Qualifiers
source 1..1735
/db_xref="H-InvDB:HIT000041929"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45278 IMAGE:5176855"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1735
/gene="DPT"
/gene_synonym="TRAMP"
/db_xref="GeneID:1805"
/db_xref="HGNC:HGNC:3011"
/db_xref="MIM:125597"
CDS 17..622
/gene="DPT"
/gene_synonym="TRAMP"
/codon_start=1
/product="dermatopontin"
/protein_id="AAH33736.1"
/db_xref="GeneID:1805"
/db_xref="HGNC:HGNC:3011"
/db_xref="MIM:125597"
/translation="MDLSLLWVLLPLVTMAWGQYGDYGYPYQQYHDYSDDGWVNLNRQ
GFSYQCPQGQVIVAVRSIFSKKEGSDRQWNYACMPTPQSLGEPTECWWEEINRAGMEW
YQTCSNNGLVAGFQSRYFESVLDREWQFYCCRYSKRCPYSCWLTIEYPGHYGEEMDMI
SYNYDYYIRGATTTFSAVERDRQWKFIMCRMTEYDCEFANV"
BASE COUNT 480 a 384 c 462 g 409 t
ORIGIN
1 caaaatccca ggcagcatgg acctcagtct tctctgggta cttctgcccc tagtcaccat
61 ggcctggggc cagtatggcg attatggata cccataccag cagtatcatg actacagcga
121 tgatgggtgg gtgaatttga accggcaagg cttcagctac cagtgtcccc aggggcaggt
181 gatagtggcc gtgaggagca tcttcagcaa gaaggaaggt tctgacagac aatggaacta
241 cgcctgcatg cccacaccac agagcctcgg ggaacccacg gagtgctggt gggaggagat
301 caacagggct ggcatggaat ggtaccagac gtgctccaac aatgggctgg tggcaggatt
361 ccagagccgc tacttcgagt cagtgctgga tcgggagtgg cagttttact gttgtcgcta
421 cagcaagagg tgcccatatt cctgctggct aacaatagaa tatccaggtc actatggtga
481 ggaaatggac atgatttcct acaattatga ttactatatc cgaggagcaa caaccacttt
541 ctctgcagtg gaaagggatc gccagtggaa gttcataatg tgccggatga ctgaatacga
601 ctgtgaattt gcaaatgttt agatttgcca cataccaaat ctgggtgaaa ggaaaggggc
661 cggggacagg agggtgtcca catatgttaa catcagttgg atctcctata gaagtttctg
721 ctgctctctt tccttctccc tgagctggta actgcaatgc caacttcctg ggcctttctg
781 actagtatca cacttctaat aaaatccaca attaaaccat gtttctcact tttcacatgt
841 ttcatagcaa ctgctttata tgactgatga tggcttcctt gcacaccaca tatacagtgc
901 gcatgcttac agccgggctt ctggagcacc agctgcagcc tggctactgc tttttactgc
961 agaatgaact gcaagttcag catagtggag gggagaggca gaactggagg agaggtgcag
1021 tgaaggttct ctacagctaa gcctgtttga atgatacgta ggttccccac caaaagcagg
1081 ctttctgccc tgagggacat cttcccactc ccctgctcca catgagccat gcatgcttag
1141 caatccaagt gcagagctct ttgctccagg agtgaggaga ctgggaggtg aaatggggaa
1201 atggaagggt ttggaggcag agctgaaaac agggttggaa ggatttcctg aattagaaga
1261 caaacgttag catacccagt aaggaaaatg agtgcagggg ccaggggaac ccgtgaggat
1321 cactctcaaa tgagattaaa aacaaggaag cagagaatgg tcagagaatg ggattcagat
1381 tgggaacttg tggggatgag agtgaccagg ttgaactggg aagtggaaaa aggagtttga
1441 gtcactggca cctagaagcc tgcccacgat tcctaggaag gctggcagac accctggaac
1501 cctggggagc tactggcaaa ctctcctgga ttgggcctga tttttttggt gggaaaggct
1561 gccctgggga tcaactttcc ttctgtgtgt ggctcaggag ttcttctgca gagatggcgc
1621 tatctttcct cctcctgtga tgtcctgctc ccaaccattt gtactcttca ttacaaaaga
1681 aataaaaata ttaacgttca ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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