LOCUS BC033709 3861 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens chromosome X open reading frame 57, mRNA (cDNA clone
MGC:45414 IMAGE:3910777), complete cds.
ACCESSION BC033709
VERSION BC033709.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3861)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3861)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: c Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46195791.
FEATURES Location/Qualifiers
source 1..3861
/db_xref="H-InvDB:HIT000259063"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45414 IMAGE:3910777"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3861
/gene="CXorf57"
/gene_synonym="FLJ10178"
/gene_synonym="FLJ14191"
/gene_synonym="RP11-647M7.1"
/db_xref="GeneID:55086"
/db_xref="HGNC:HGNC:25486"
CDS 64..2631
/gene="CXorf57"
/gene_synonym="FLJ10178"
/gene_synonym="FLJ14191"
/gene_synonym="RP11-647M7.1"
/codon_start=1
/product="chromosome X open reading frame 57"
/protein_id="AAH33709.1"
/db_xref="GeneID:55086"
/db_xref="HGNC:HGNC:25486"
/translation="MSGESGQPEAGPSHAGLDWPNPERNRAGVPGGVIRRAGSQGPRS
WIQKVLEQIMDSPRQCVTPSEVVPVTVLAVQRYLLEDEPRDTVPKPPLYCYDVTISDG
VYQEKCYLDPSLNSLVYQNILKVGIQMRISRVSCLYNEKRIGQGILCIDNVHCGETSD
SISLETPFRNRAHQEKPERPLRGGKSHYLALWNNEDPYGDIWLTDKQPEEHNFSDTKI
ISLSHLEMTWTNRRNFPALLVRILHKSKLRYYGKPDKKMIEPYQTFLEVADSSGTVSV
IMWNALCPEWYKSLRVGLVLLLQDYSVKKSYPFRIQPVPVDPQIKLISTMEICLNLRD
PPTNIIIIPEKQVKPEWRLPKLNHRFTTRSELDDMPENCICDVIGLLVFVGRVQRSKK
KENREDFWSYRWIHIADGTSEQPFIVELFSTSQPEIFENIYPMAYFVCTQLKVVRNDN
QVPKLLYLTTTNESGVFITGHRGQPYTYDAKVKNFIQWIRTKSDSGEQKNMVIGGYYP
YPPVPETFSKYSSSIKVESLLTAISEVRKEIEDLQYREQKRIAIQGIITAIKYIPHSS
ATESASASETLRNANRPSTSQAARVEMQERNGKRHQDDEPVNSQYFQTTSTNLSLSNK
IRILQGPHANPVAVPQPGASVQTKGIKPGMPSIFNRRANINANLQGKARKTISDRWES
QLWREKKFGLIDHLHYSRVYPESIPRKFMFEHRKFLSDQYNSQPAKYVPPEGRPPKLD
DFKSARSLGHFEVTILGLNHEIAIDVAFLPMYCPEDIRTSQIDTLLTSMNYSCAYPQD
TTGNDRLPGPRAVAGDIIKAATELDRVHIVGILDICNLGNNKVEVYLHKIYSPENTS"
BASE COUNT 1218 a 721 c 804 g 1118 t
ORIGIN
1 ccacgcgtcc gggacggggc aaactagctt ttgggagtga agcgggtacg cagttatcca
61 acaatgtctg gtgagtcagg acagcctgag gctggtccct cacatgcagg gctagattgg
121 ccgaaccctg agaggaatcg ggctggggtc ccgggagggg tgatccgaag agctggttcc
181 caagggccca ggtcctggat ccaaaaggtt cttgagcaga ttatggactc acctcgccag
241 tgtgtcaccc cctcggaggt ggtgcctgta actgtgctgg ccgtccagag gtacctgtta
301 gaggatgagc cacgcgacac ggtgcccaag cctccccttt attgctatga tgtgacgatc
361 tcagatgggg tgtaccagga gaagtgctac ctggacccca gcttgaactc tctcgtatat
421 caaaatattc ttaaagttgg cattcaaatg agaatttcca gggtctcatg tctttacaat
481 gagaaaagga taggccaggg gatcctgtgc atagataacg tccactgtgg ggagacttca
541 gacagtattt ctttagaaac tcccttcaga aatagagcgc accaggagaa accagagagg
601 cctttaagag gcgggaagag tcattacctg gcgctgtgga ataacgaaga tccctatgga
661 gatatctggt taacagacaa gcaacctgag gaacacaact ttagcgatac caaaataatt
721 tccctttctc atcttgaaat gacctggact aacagaagaa attttcctgc attgcttgtg
781 aggatcttac ataaatcaaa actgcgatac tatggaaaac ctgataaaaa gatgattgaa
841 ccatatcaga cctttttgga agttgctgac agttcaggca cagtgtcagt gattatgtgg
901 aatgccctgt gtcctgagtg gtataaaagt ttgcgggttg gtttagttct tctgcttcaa
961 gactattctg ttaaaaagag ttatccattc agaatacagc ctgtccccgt ggatccacag
1021 atcaaactaa tttctacaat ggaaatctgc ctgaatcttc gagatccccc aacaaatata
1081 attatcattc cagaaaagca ggtgaaacca gaatggagac tgccaaagct aaatcaccga
1141 tttaccacaa ggtcagaact ggatgatatg ccagaaaatt gcatctgtga tgttattggc
1201 cttttagttt ttgtaggaag ggtccagcgg tcaaaaaaga aagaaaaccg tgaagatttt
1261 tggtcatatc gctggattca cattgctgac ggtacttcag aacaaccatt tatagtggaa
1321 ctgttttcaa catcgcagcc agaaatcttt gaaaatattt acccaatggc atattttgtg
1381 tgtacacagt tgaaagttgt cagaaatgac aatcaagtac ctaagctgct ttacctcacc
1441 actacaaatg agagtggagt gtttattact ggtcatagag gccagccgta tacgtatgat
1501 gccaaggtaa aaaactttat tcaatggatt agaacaaagt ctgattccgg ggaacagaag
1561 aatatggtta ttggtggata ttacccctat ccaccagtgc cagagacatt ttccaagtat
1621 agtagttcta ttaaagttga gtcgctcttg acagctataa gtgaagtcag gaaggagatt
1681 gaagacttgc agtataggga acaaaagcgc attgcaattc aggggataat tactgctata
1741 aagtatatcc cccatagcag tgcgactgaa agtgcctcag catcagaaac acttcggaat
1801 gctaacagac cctcgacctc tcaagcagct agagtagaaa tgcaagaaag aaatggtaaa
1861 cggcatcaag atgatgagcc tgtgaattct cagtatttcc aaactacatc tacaaattta
1921 agtctgagca ataaaataag aattcttcaa ggcccacacg ctaatccagt tgctgtacct
1981 caaccaggag cttctgtaca aacaaaggga attaaaccgg gcatgccaag catcttcaac
2041 cgtcgagcaa atataaatgc taatctgcaa gggaaagcca gaaaaactat aagtgatagg
2101 tgggagagtc agctgtggag agagaaaaag tttggcttaa tagatcacct acactacagc
2161 cgtgtttatc ctgaaagtat tccacggaaa tttatgtttg aacacagaaa gtttcttagt
2221 gaccagtata attctcagcc tgcgaaatat gtaccaccag aaggaaggcc cccaaaactt
2281 gatgatttta agagcgcccg aagccttgga cattttgaag taaccatact aggtctgaac
2341 catgagatag caatcgatgt tgctttccta cccatgtatt gtccagaaga tattcgaaca
2401 tctcaaatag acacactgtt gacctccatg aattacagct gtgcatatcc acaggacaca
2461 actggaaatg accgattgcc aggtccaaga gcggttgcag gtgatattat aaaagcagca
2521 actgaactgg atagagtgca tatcgtcggt atcttggata tctgtaattt gggtaataat
2581 aaagtggaag tctatttgca caagatttat agtccagaga atacttctta aaagttagca
2641 aatgaaatta ttacagatta tacgagtgta ctgctttaaa gatattccat cattttgctg
2701 gtaatttcag taactgtttt cagcaagaat attacatgag ctctaaagtt attaagcagt
2761 tttatgttcg ttttgtgttt agggagcttt ttaaaacact tcatttcaga ttcattattg
2821 aaaaaggtca tcaaaataat ttttgtgtat aagggaattt accttgctta ccttactagt
2881 atgactatta tcttgacttc tggtaattta tgttcactat tccatttgtg aagtgtactt
2941 tcattctaaa gcctcagtat aaggcatcct aacttacaag agtaactttc catggacatt
3001 taacatcctt ccaattttat tcacatataa tgggaaattt tgaattgcca gtttgaagac
3061 tgttctccta aagtgttcaa cctgcacttc ttacaaccaa ggtagtttgt atcattttca
3121 aaagtacaca ttattagggt ctagttgccc ctggtcctta gcttgctcag ctgcaaaata
3181 agcgtgctaa attaaattgt cttaaggttt ttccacttca ttttgtgact ttgtgtggtt
3241 cgaatttctc agtattttaa ccagtgtgtt gatgttaaag tcaaaggccg cagtatgtct
3301 atattcttgc tgtactcatt ggtagtttca gtatatgtaa tgtgagttta aatagtgaaa
3361 ttgtatctca tattaacatt tcaaatgctc atattgaaaa tggaaaatag taaacacagg
3421 aattgatttt attctggttg tctataatac ttcattttaa atgtaaatgg ccactctgca
3481 tttgcaaggc ccggtggttg acatctgtgt ggtttgttag atgagacaaa atgaccatta
3541 aatgagttta tagattattc tgtatcaaga taaatctgat tccagttaag ctataaactt
3601 gtgggatttt cttgtagccc tatagttctg tgacttcatt tgctatacgc tttaaatgtg
3661 ttgagcagcc tatgaaccta aagacatact gcagtttgtt cataaatgta ttcagtcttt
3721 tattctttat aattgtgtgt aaatgttaac taaacagtgg attcctctcg tgttacagtt
3781 ttgagtgaat tattaaagaa gttaaaatgc aataaaaaaa aaaaaaaaaa aaaaaaaaaa
3841 aaaaaaaaaa aaaaaaaaaa a
//