LOCUS BC033681 1470 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens chromosome 16 open reading frame 89, mRNA (cDNA clone
MGC:45438 IMAGE:5190553), complete cds.
ACCESSION BC033681
VERSION BC033681.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1470)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1470)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543192.
FEATURES Location/Qualifiers
source 1..1470
/db_xref="H-InvDB:HIT000041900"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45438 IMAGE:5190553"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1470
/gene="C16orf89"
/db_xref="GeneID:146556"
/db_xref="HGNC:HGNC:28687"
CDS 19..1218
/gene="C16orf89"
/codon_start=1
/product="C16orf89 protein"
/protein_id="AAH33681.1"
/db_xref="GeneID:146556"
/db_xref="HGNC:HGNC:28687"
/translation="MSARGRWEGGGRRACRGSLGLARAQGAERVTSSEQRPAMASLGL
LLLLLLTALPPLWSSSLPGLDTAESKATIADLILSALERATVFLEQRLPEINLDGMVG
VRVLEEQLKSVREKWAQEPLLQPLSLRVGMLGEKLEAAIQRSLHYLKLSDPKYLREFQ
LTLQPGFWKLPHAWIHTDASLVYPTFGPQDSFSEERSDVCLVQLLGTGTDSSEPCGLS
DLCRSLMTKPGCSGYCLSHQLLFFLWARMRGCTQAPLQQSQDYINLFCANMMDLNRRA
EAIGYAYPTRDIFMENIMFCGMGGFSDFYKLRWLEAILSWQKQQEGCFGEPDAEDEES
SKAIQYQQHFSRRVKRREKQFPDGCSSHNTATAVAALGGFLYILAEYPPANREPHPST
PPPPSSR"
BASE COUNT 359 a 420 c 431 g 260 t
ORIGIN
1 gccgggccac ttgtcttcat gtctgccagg gggaggtggg aaggaggtgg gaggagggcg
61 tgcagaggca gtctgggctt ggccagagct cagggtgctg agcgtgtgac cagcagtgag
121 cagaggccgg ccatggccag cctggggctg ctgctcctgc tcttactgac agcactgcca
181 ccgctgtggt cctcctcact gcctgggctg gacactgctg aaagtaaagc caccattgca
241 gacctgatcc tgtctgcgct ggagagagcc accgtcttcc tagaacagag gctgcctgaa
301 atcaacctgg atggcatggt gggggtccga gtgctggaag agcagctaaa aagtgtccgg
361 gagaagtggg cccaggagcc cctgctgcag ccgctgagcc tgcgcgtggg gatgctgggg
421 gagaagctgg aggctgccat ccagagatcc ctccactacc tcaagctgag tgatcccaag
481 tacctaagag agttccagct gaccctccag cccgggtttt ggaagctccc acatgcctgg
541 atccacactg atgcctcctt ggtgtacccc acgttcgggc cccaggactc attctcagag
601 gagagaagtg acgtgtgcct ggtgcagctg ctgggaaccg ggacggacag cagcgagccc
661 tgcggcctct cagacctctg caggagcctc atgaccaagc ccggctgctc aggctactgc
721 ctgtcccacc aactgctctt cttcctctgg gccagaatga ggggatgcac acaggcacca
781 ctccaacaga gccaggacta tatcaacctc ttctgcgcca acatgatgga cttgaaccgc
841 agagctgagg ccatcggata cgcctaccct acccgggaca tcttcatgga aaacatcatg
901 ttctgtggaa tgggcggctt ctccgacttc tacaagctcc ggtggctgga ggccattctc
961 agctggcaga aacagcagga aggatgcttc ggggagcctg atgctgaaga tgaagaatca
1021 tctaaagcta ttcaatatca gcagcatttt tcgaggagag tgaagaggcg agaaaaacaa
1081 tttccagatg gctgctcctc ccacaacaca gccacagcag tggcagccct gggtggcttc
1141 ctatacatcc tggcagaata ccccccagca aacagagagc cacacccatc cacaccgcca
1201 ccaccaagca gccgctgaga cggacggttc catgccagct gcctggagga ggaacagacc
1261 cctttagtcc tcatccctta gatcctggag ggcacggatc acatcctggg aagaaggcat
1321 ctggaggata agcaaagcca ccccgacacc caatcttgga agccctgagt aggcagggcc
1381 agggtaggtg ggggccggga gggacccagg tgtgaacgga tgaataaagt tcaactgcaa
1441 ctgaaaaaaa aaaaaaaaaa aaaaaaaaaa
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