LOCUS BC033677 1888 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 114, mRNA (cDNA clone
MGC:45110 IMAGE:5176852), complete cds.
ACCESSION BC033677
VERSION BC033677.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1888)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1888)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38679911.
FEATURES Location/Qualifiers
source 1..1888
/db_xref="H-InvDB:HIT000259059"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45110 IMAGE:5176852"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1888
/gene="C9orf114"
/gene_synonym="DKFZP566D143"
/gene_synonym="HSPC109"
/gene_synonym="RP11-545E17.7"
/db_xref="GeneID:51490"
/db_xref="HGNC:HGNC:26933"
CDS 10..1140
/gene="C9orf114"
/gene_synonym="DKFZP566D143"
/gene_synonym="HSPC109"
/gene_synonym="RP11-545E17.7"
/codon_start=1
/product="chromosome 9 open reading frame 114"
/protein_id="AAH33677.1"
/db_xref="GeneID:51490"
/db_xref="HGNC:HGNC:26933"
/translation="MAERGRKRPCGPGEHGQRIEWRKWKQQKKEEKKKWKDLKLMKKL
ERQRAQEEQAKRLEEEEAAAEKEDRGRPYTLSVALPGSILDNAQSPELRTYLAGQIAR
ACAIFCVDEIVVFDEEGQDAKTVEGEFRGVGKKGQACVQLARILQYLECPQYLRKAFF
PKHQDLQFAGLLNPLDSPHHMRQDEESEFREGIVVDRPTRPGHGSFVNCGMKKEVKID
KNLEPGLRVTVRLNQQQHPDCKTYHGKVVSSQDPRTKAGLYWGYTVRLASCLSAVFAE
APFQDGYDLTIGTSERGSDVASAQLPNFRHALVVFGGLQGLEAGADADPNLEVAEPSV
LFDLYVNTYPGQGSRTIRTEEAILISLAALQPGLIQAGARHT"
BASE COUNT 450 a 540 c 553 g 345 t
ORIGIN
1 gtgcggaaca tggcggagcg cggcaggaag cggccgtgcg gcccgggtga acacggccaa
61 aggattgagt ggcgaaaatg gaagcaacag aagaaagagg agaaaaaaaa atggaaggat
121 ctcaagctga tgaaaaaact ggagcggcag cgggcacagg aggaacaggc aaagcgcctg
181 gaagaggagg aggcagcggc agagaaggag gaccgcgggc ggccctacac actgagcgta
241 gccctgccgg gctccatcct ggacaatgct cagtcgccgg agcttcgcac ctacttggcc
301 ggtcagattg ccagagcctg tgccatcttc tgtgtggatg agatcgtggt gtttgatgag
361 gagggccagg atgccaagac tgtggagggg gaattcagag gagttgggaa gaaggggcag
421 gcgtgcgtac agctggcccg gatcctgcag tacctggagt gtccacagta cctgaggaag
481 gcgttcttcc ccaagcacca ggatctacag tttgcagggc tcctgaaccc cctggacagc
541 ccccaccaca tgcgtcagga tgaggaatcc gagttccgag agggcatcgt ggtggatcgg
601 cccacccggc caggccacgg ctcctttgtc aactgtggca tgaaaaagga ggtgaagatt
661 gacaagaacc tggagcccgg gcttcgggtg actgtgcgac tgaaccagca gcagcaccca
721 gactgcaaga cctaccatgg caaagtggta tcatcgcagg accctcgcac caaagctggt
781 ctctactggg gctacaccgt ccgactggct tcctgcctca gtgctgtgtt tgctgaggcc
841 cccttccaag atgggtatga cctgaccatc gggacgtcag agcgcggctc agatgtggct
901 tctgcccagc ttcccaactt caggcatgct cttgtggtgt tcgggggcct ccagggtctg
961 gaagctggag cggatgctga ccccaacctg gaggtggctg aacccagtgt cctctttgac
1021 ctgtacgtca atacctatcc tggccagggt agccgtacca tccgcacgga ggaagccatc
1081 ctcatctccc tggccgccct gcagcctggc ctcatccagg cgggtgcccg gcacacctga
1141 aagttctaag gggccgagga catcagtgaa gcagcagtga aaccaggggc tctgcaggtc
1201 acttgggacg gacgccacca gacttgtctc caaaaatcac cacctttaat actccccggc
1261 ctgcacacac ccacagtctc actgggctcc accctcactt actgcccgcc gtgatggcct
1321 tgaggctgcc tgcccgcgcc aggatgtttg gcacaaagag cagccccgaa gcccgctcaa
1381 tgctctcgat gggcaccagg aagcgctcca gtgggatggc ctcatccaca ggtgcgttgg
1441 gcatcacgta ggtgcggagc tcaatttgcc cacctgctgc ctccaggatc agcaccttga
1501 agaagtgtgt gggcactgcc acgtggttct tgccgatgac ctggtacttt acgtaggatt
1561 tcccatcagc ctctgtcctg tgggcagacc caggcacacg tgggcagggg gcctggatga
1621 acccaaagcc acctcttcca ggcagccttc cctgatctgt cctctaactt ctgtcaacct
1681 gcaggaccac gccctcactg tgagacttct gtagcctgcc tggctcctcc ttgaggctgg
1741 aactctctcc agggtggtta actctttccc tctgttttcc ttatgcccaa cactgggtca
1801 ggcagagtgg gcgacaataa acgctgctag gagaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//