LOCUS BC033666 1622 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 100, mRNA (cDNA clone
MGC:44886 IMAGE:5000577), complete cds.
ACCESSION BC033666
VERSION BC033666.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1622)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1622)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: g Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14249513.
FEATURES Location/Qualifiers
source 1..1622
/db_xref="H-InvDB:HIT000041892"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44886 IMAGE:5000577"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1622
/gene="C9orf100"
/gene_synonym="FLJ14642"
/gene_synonym="MGC44886"
/gene_synonym="RP11-331F9.7"
/db_xref="GeneID:84904"
/db_xref="HGNC:HGNC:25909"
CDS 50..1057
/gene="C9orf100"
/gene_synonym="FLJ14642"
/gene_synonym="MGC44886"
/gene_synonym="RP11-331F9.7"
/codon_start=1
/product="chromosome 9 open reading frame 100"
/protein_id="AAH33666.1"
/db_xref="GeneID:84904"
/db_xref="HGNC:HGNC:25909"
/translation="MELSCPGSRCPVQEQRARWERKRACTARELLETERRYQEQLGLV
ATYFLGILKAKGTLRPPERQALFGSWELIYGASQELLPYLEGGCWGQGLEGFCRHLEL
YNQFAANSERSQTTLQEQLKKNKGFRRFVRLQEGRPEFGGLQLQDLLPLPLQRLQQYE
NLVVALAENTGPNSPDHQQLTRAARLISETAQRVHTIGQKQKNDQHLRRVQALLSGRQ
AKGLTSGRWFLRQGWLLVVPPHGEPRPRMFFLFTDVLLMAKPRPPLHLLRSGTFACKA
LYPMAQCHLSRVFGHSGGPCGGLLSLSFPHEKLLLMSTDQEELSRWYHSLTWAISSQK
N"
BASE COUNT 390 a 449 c 425 g 358 t
ORIGIN
1 ccacgcgtcc gcggactgca gccggaagtg tcgatccctc agccagggca tggagctctc
61 ctgccccggt tcgcggtgcc cggtgcaaga gcagcgtgcc cgctgggagc ggaaacgcgc
121 ctgcaccgcc cgggagctgc tagagaccga gcggcgctac caagaacagc tggggctggt
181 ggccacgtac tttttgggga tcctgaaagc caaggggacc ctgcgaccac ctgagcgcca
241 ggccctgttt ggctcctggg agctcatcta cggcgccagc caggagctgc ttccctacct
301 ggaaggagga tgctggggcc aagggctgga gggcttctgc cgccacttgg agctctataa
361 ccaatttgct gccaactcag agaggtccca gaccaccctg caggagcagc taaagaaaaa
421 taaaggtttc cggaggtttg tacggcttca ggaaggccgc cctgagtttg ggggccttca
481 gctccaggac ctgctccctc tgcctctgca acggctccag cagtatgaga atctcgtcgt
541 agctttggct gaaaacacag gtcccaacag ccctgaccat caacagctca cacgggctgc
601 ccgactgata agtgagactg cccagagagt ccatactatt ggtcagaaac agaagaatga
661 ccagcacctt cggcgtgtcc aggctctgct cagtggacgc caggcaaagg ggctgacctc
721 agggcgctgg ttcctacgcc agggctggct gttagtggtg cctccccatg gggagcctcg
781 gccccgcatg ttcttcctct tcactgatgt gctcctcatg gccaagcctc ggcctccact
841 gcacctgctg cggagtggca cctttgcctg caaggccctc taccccatgg cccagtgtca
901 tctcagcagg gtctttggcc actcaggagg cccttgtggt gggttgctca gtctgtcctt
961 ccctcatgag aagctactgc ttatgtccac agaccaggag gagctgtcac gctggtacca
1021 cagtctgact tgggctatca gcagccagaa aaactagagg aatcttatag attccagaac
1081 tcaggatacc tcagggatag gtcacagcca agagtacaaa ggaatcttca gtactgaaca
1141 aaacagaacc cttcatgatt tgacaaaggt cactttctgt ttgcctggac caagctactc
1201 cagatcatct gaccaactct taaaaatcac ggccaggcac agtggctcat gcctgtaatc
1261 ccagcacttt gggaagcaga ggtggcagga tcattccagc ccaggagttc aagaccagcc
1321 tgggcaacac agtgagtgag accctgtctc tatttaagaa aaaataatta agaaatttta
1381 ttaaaaaaga agaatcagga aaccaagtcc aacccaacta aacctcaaat gaaccagccc
1441 ctaacacaga tgaggggatt tgggactgat aagctctgtg ctgtgtccat ggcccgtcat
1501 ttatcaaggc tgcagctttg taaatgtggc tatttttatg ttgtgtatag tttctatcat
1561 ttatttttcc actggatttg agtaaagttt tttttctttt ttttgggaaa aaaaaaaaaa
1621 aa
//