LOCUS BC033652 5429 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens bromodomain and PHD finger containing, 3, mRNA (cDNA clone IMAGE:4154313), partial cds. ACCESSION BC033652 VERSION BC033652.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5429) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5429) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC033652.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: a Column: 23. FEATURES Location/Qualifiers source 1..5429 /db_xref="H-InvDB:HIT000093173" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4154313" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..5429 /gene="BRPF3" /gene_synonym="KIAA1286" /db_xref="GeneID:27154" CDS <1..1809 /gene="BRPF3" /gene_synonym="KIAA1286" /codon_start=1 /product="BRPF3 protein" /protein_id="AAH33652.2" /db_xref="GeneID:27154" /translation="GRVGRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITEDELTA QDITECNSNKENSEQPQFPGKSKKPSSKGKKKESCSKHASGTSFHLPQPSFRMVDSGI QPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLDMVNEKRRVDGHSLVSADTF ELLVDRLEKESYLESRSSGAQQSLIDEDAFCCVCLDDECHNSNVILFCDICNLAVHQE CYGVPYIPEGQWLCRCCLQSPSRPVDCILCPNKGGAFKQTSDGHWAHVVCAIWIPEVC FANTVFLEPIEGIDNIPPARWKLTCYICKQKGLGAAIQCHKVNCYTAFHVTCAQRAGL FMKIEPMRETSLNGTIFTVRKTAYCEAHSPPGAATARRKGDSPRSISETGDEEGLKEG DGEEEEEEEVEEEEQEAQGGVSGSLKGVPKKSKMSLKQKIKKEPEEAGQDTPSTLPML AVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRN AEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAMELE LMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVLYV" misc_feature 277..1098 /gene="BRPF3" /gene_synonym="KIAA1286" /note="COG5141; Region: COG5141, PHD zinc finger-containing protein [General function prediction only]" /db_xref="CDD:COG5141" BASE COUNT 1334 a 1476 c 1363 g 1256 t ORIGIN 1 ggacgcgtgg gccgggagac cctgacatat gcccaggccc agcggattgt cgaggtagac 61 attgatggac gcctgcatcg tatcagcatc tatgacccac tcaaaatcat tactgaagat 121 gagctaactg cccaggatat caccgaatgc aatagtaaca aggaaaacag tgaacagcct 181 cagttccctg gcaagtccaa gaaaccctca tccaagggca aaaagaagga atcctgctcc 241 aagcatgcat ctggtacttc cttccacctc ccacagccca gcttccgtat ggtggactca 301 ggcatccagc cagaagcacc cccgctgcct gctgcctact accgctacat tgagaagcca 361 cctgaagacc tggatgcaga ggtagagtat gacatggatg aggaggacct tgcctggctg 421 gacatggtga atgaaaaacg gcgagtagat gggcacagtt tggtgtctgc agataccttt 481 gagctgctgg tagaccggct tgagaaagag tcatacttgg agagtcgcag cagtggggcc 541 caacagtcac tcatcgatga agacgctttc tgctgtgtgt gcctggatga tgaatgtcac 601 aatagcaatg ttattctctt ctgtgacatc tgcaacctgg ctgtacacca ggagtgctat 661 ggcgtcccat acatccctga gggccagtgg ctatgccgct gctgcctgca gtctccctcc 721 cggcctgtgg attgcatcct ttgccccaat aagggtggcg ccttcaaaca gaccagtgat 781 gggcactggg cccatgtggt gtgtgccatc tggatccctg aagtctgctt tgctaacacc 841 gtgttcttgg aacctattga gggcattgac aatatcccgc ctgcccgctg gaaactaacc 901 tgctatatct gcaagcagaa agggctaggt gcagccatcc agtgccataa ggtgaactgc 961 tacacagcat tccatgtgac atgtgcacag cgggctgggc tcttcatgaa gattgagccc 1021 atgcgcgaaa ccagcctcaa tggcaccatc tttacagtgc gcaagactgc ctactgtgag 1081 gcccactcgc caccaggtgc ggccactgct aggaggaagg gcgactcccc tagaagcatc 1141 agtgagactg gcgatgagga agggctgaag gagggtgatg gagaggagga agaagaggaa 1201 gaggtggagg aagaagagca ggaagctcaa ggcggggtga gtggctccct caagggagtg 1261 cccaagaaaa gcaagatgag tttgaagcag aagatcaaga aggagccaga ggaagcaggc 1321 caagacacac cctccactct ccccatgctt gctgtcccac agataccctc ttacaggttg 1381 aacaagatct gtagtggtct ctcctttcag aggaaaaacc agtttatgca gcggcttcac 1441 aattattggc tgttgaagcg gcaggcacgg aatggtgtcc ctcttatccg gcgcttgcac 1501 tcccatctgc agtcccaaag aaacgctgag cagcgagagc aggatgagaa gacaagtgca 1561 gtgaaggagg agctgaagta ttggcagaag ctccggcatg acttggagcg ggcgcggctg 1621 ctgattgagc tgattcggaa gagagagaag ctcaaacgag agcaggtcaa agtccagcag 1681 gctgccatgg agctggagct gatgccattc aatgttctgt tgaggacaac actggacctg 1741 ctgcaggaga aggatcctgc acacatcttc gcagaaccag tcaacttgag tgaggtttta 1801 tatgtttagg ttccagatta cctggaattc atatccaagc caatggattt ttctactatg 1861 aggcggaagc tggagtccca cctgtaccgc accttggagg agtttgagga ggactttaac 1921 cttatagtta ccaactgcat gaagtataat gctaaagaca caattttcca ccgagcagct 1981 gtccgcctgc gggacctggg aggggccatc ctacggcacg cccggcggca ggcagagaac 2041 atcggctatg accccgagag gggcactcac ctgcccgagt cacccaaatt ggaagacttt 2101 taccgcttct cctgggaaga cgtggacaac atcctcatcc cagagaaccg ggcccatttg 2161 tccccagagg tgcagctgaa ggagctgctg gagaaactgg acctggtgag cgccatgcgg 2221 tccagtgggg cccgcacccg tcgtgtccgc ctgctacgcc gggagatcaa tgcccttcgg 2281 cagaagctgg cacagccacc accaccacag ccaccatcac tcaacaagac agtatccaat 2341 ggggagctgc cagcagggcc ccagggggat gcagctgtgc tggagcaggc cttgcaggag 2401 gagccagaag acgatgggga cagagatgac tccaaactgc ctcctccgcc aaccctggag 2461 cccactgggc ctgcaccttc cttgtctgag caagaatccc ccccggagcc ccctactctg 2521 aaacccatta atgatagcaa acctccaagc aggttcctaa agcccagaaa ggtggaagaa 2581 gatgagctct tggaaaaatc accactgcag ctagggaatg agcctttgca acgcttgctc 2641 agtgacaatg gcatcaacag actatccctc atggcccctg acaccccggc cggtacccca 2701 cttagtggtg tgggtcgccg cacatcagtc ctcttcaaga aggccaagaa tggggttaag 2761 ctacagagaa gcccagacag ggtcctggag aatggcgagg accatggtgt ggcaggctct 2821 cctgcctctc cagccagcat cgaggaagag cgccactccc ggaagcggcc aaggagcagg 2881 agctgtagtg agagcgaagg ggagaggtcc ccccagcagg aggaagagac aggcatgacc 2941 aacggctttg gaaaacacac cgaaagcggg tctgactctg aatgtagttt gggtctcagt 3001 ggtggactgg catttgaagc ttgcaggcag tggcttccaa gggacaaagt cctgcccttg 3061 ggtgtggaag acaccgtgga caagctcaag atgctggaag gccgcaagac cagcatccgc 3121 aagtcagtgc aggtggccta tgaccgtgcg atgatccacc tgagcagagt ccgggggccc 3181 cactccttcg tcacttccag ctacctgtaa gggcagggct gggcctgcat ccgcttgccc 3241 tgcctccatc ccgcagggca cagagaagcc tcttctgccc ctgccagatg tatggccggc 3301 agcttccccc tctcatggta ggccagggac tgggctttct ccccactaag ggcaaggccc 3361 cagttttgac caatcgcatg gttctcctgg caggcctgct ctgtgccaaa aactcccacc 3421 caaggtccct caggggatat ttcactgaag aaccagttag aagtagaaac agctgtgggg 3481 cttgggccca gcttaggaga ttgcccagat ggcaagaggt cctgggctcc ttcttgaggg 3541 gctgcctggc ccgctccatc ctactcccac taactacacc tcagggcggg tgaggttccg 3601 acactgatcc cagagatgcc gtggatacgc cagggtccca gggggaatct ccccaagctc 3661 acactctctc ccgcttatcg cctattctca cacctcttct cggtcccatc ttctgcaccc 3721 attgcccagt cttgctttct ctttcccata ttccttttct ttttctcttg tgccaaactg 3781 acagaaaccg tcaccacact ggtctttttc tttaatgtct cattcccctt gaggccagct 3841 gctatgccag gtggtgtctc tgccaggctc ctcaggccca gacagaggcc agcccacaac 3901 ctatgacccc ctcccccagg acaccacctc ccacccacag accttccctt tagctgttga 3961 cacaacttcc cagctctgca agtgtgcccc ctggatcaag gcgggtcccc tcttgttttt 4021 ttctttgctg ccacgaggtg gtccaagcct tcagggtggg ctcctatcag gctgggtgtg 4081 cgagtgtcca tctgtccaca tggatgtcga gggtggtttg tgtggagctg tgctcgtcag 4141 ctgggtctgc cctcttcccc cttttctcct tcttctctcc tcatggactt tttctgcaat 4201 tgcagtctta agcttcactc tccaccacct ggatggcatg gcgcctgcca ccaaacatct 4261 tcctggcctg cgctctgccc tgccctgcct agcctctgct actcccactt cccaactcca 4321 gggaatgcat tacttttatt tcaaaccctc tgcctccttc cttctttctc ttcaaccccc 4381 tccccacctt caccttctca aaaatggaag gaaaaaaaaa ctgtgaatgg ggaatgctga 4441 ctgacaaacc aacacaactt tcagaggctt cagtgtctgt tctctggaca tttcttttca 4501 cctcctgagc accaaagtcg cagggccagt tgcaggccgc tgattgccat gttgattttt 4561 aacctgatat tctttttaat tgttttaaat ttttcatagg ggagttttgg acaaaacagt 4621 cactggggag atcactgcca tttttacaca cttgactttt taaaaataca accaaccaac 4681 caccacaact tcttatacat ttgggacatg agccagagtt taaaagggaa ccaacaaaac 4741 actataactt aaaaggatgg ggttttggat tttgtataat aataaaaaca atacagcata 4801 tggctaggga aggacatggt gtatataatt gtaaaatact gttctaaatt attcaggcct 4861 atagtttcca ttactggagt cctccattgt gtggccacac agtgtcgttg atttaaagga 4921 gccagtgctt cccctctccc caggtagttg gtcagctgtg gactctgtga cctttgtcta 4981 aacctgtgtt gtaagatctt gggacttcct ctctttctat gtctatctct tccccccaac 5041 actttctctt cttagtctct ctctttattt ttcaatctct gaatatttta gtctctctct 5101 gagtctcatt ttttaaaatg ctcttttaga acgggaaacg gctcagatcc tgctgtggca 5161 cggggcctat gtgtctctgt cgcgtctgct gtgaagcaca tgatgctcta tttattgtag 5221 agagtgactt tatttgcttt ctagaattgt ttataacaga tggtataaga gaggtaataa 5281 acagagaaaa atctatgctt gtaaagaata caaaagttaa ttttacctac tataatatga 5341 ctgtctgaaa cttattttct ctctgagaaa taaatgttct aatgggcagt aaaaaaaaaa 5401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //