LOCUS BC033637 3220 bp mRNA linear HUM 27-JAN-2004 DEFINITION Homo sapiens synovial sarcoma, X breakpoint 2 interacting protein, mRNA (cDNA clone MGC:45118 IMAGE:5578582), complete cds. ACCESSION BC033637 VERSION BC033637.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3220) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3220) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: o Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7662381. FEATURES Location/Qualifiers source 1..3220 /db_xref="H-InvDB:HIT000041877" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45118 IMAGE:5578582" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3220 /gene="SSX2IP" /gene_synonym="ADIP" /gene_synonym="KIAA0923" /db_xref="GeneID:117178" CDS 152..1996 /gene="SSX2IP" /gene_synonym="ADIP" /gene_synonym="KIAA0923" /codon_start=1 /product="SSX2IP protein" /protein_id="AAH33637.1" /db_xref="GeneID:117178" /translation="MGDWMTVTDPGLSSESKTISQYTSETKMSPSSLYSQQVLCSSIP LSKNVHSFFSAFCTEDNIEQSISYLDQELTTFGFPSLYEESKGKETKRELNIVAVLNC MNELLVLQRKNLLAQENVETQNLKLGSDMDHLQSCYSKLKEQLETSRREMIGLQERDR QLQCKNRNLHQLLKNEKDEVQKLQNIIASRATQYNHDMKRKEREYNKLKERLHQLVMN KKDKKIAMDILNYVGRADGKRGSWRTGKTEARNEDEMYKILLNDYEYRQKQILMENAE LKKVLQQMKKEMISLLSPQKKKPRERVDDSTGTVISDVEEDAGELSRESMWDLSCETV REQLTNSIRKQWRILKSHVEKLDNQVSKVHLEGFNDEDVISRQDHEQETEKLELEIQQ CKEMIKTQQQLLQQQLATAYDDDTTSLLRDCYLLEEKERLKEEWSLFKEQKKNFERER RSFTEAAIRLGLERKAFEEERASWLKQQFLNMTTFDHQNSENVKLFSAFSGSSDWDNL IVHSRQPQKKPHSVSNGSPVCMSKLTKSLPASPSTSDFCQTRSCISEHSSINVLNITA EEIKPNQVGGECTNQKWSVASRPGSQEGCYSGCSLSYTNSHVEKDDLP" BASE COUNT 1122 a 491 c 649 g 958 t ORIGIN 1 ccacgcgtcc gcgggctagg acgccgagcg gtgactcccc gccgctcccg ggggccgtga 61 cggagatgcc tacatagaag agtgacagca gctagactaa atgtttaact gctgaactag 121 ttcctcaggt atcctggctc tagagattgc tatgggagat tggatgactg ttacagatcc 181 aggtctgtct tcagaaagca aaactatctc tcaatatacc tcagaaacaa agatgtctcc 241 atcaagttta tactcacagc aagtgctatg ttcttcaata cctttatcga aaaatgtgca 301 cagttttttc agtgccttct gcacagaaga taatattgaa cagagtatct catatcttga 361 tcaggaattg actacttttg gttttccttc attatatgaa gaatccaaag gtaaagagac 421 aaagagagag ttaaatatag tagctgtact aaattgtatg aatgagctgc ttgtgcttca 481 gcggaagaac cttctagctc aggaaaatgt ggagacacag aatttgaagc tgggaagtga 541 tatggaccat ctacagagct gctactcaaa acttaaggaa caactggaaa cctccaggag 601 ggaaatgatt gggcttcagg aaagagacag acagttacaa tgtaagaaca ggaatttgca 661 tcagctacta aagaatgaga aagatgaggt gcaaaaatta caaaatatca ttgcaagtcg 721 agctactcag tataatcatg atatgaagag aaaagagcgt gaatataata aactgaagga 781 acgtctacat caacttgtta tgaacaagaa agataagaaa atagctatgg acattttgaa 841 ttatgtcggg agagctgatg gaaaaagagg ctcctggagg actggtaaaa ctgaagccag 901 gaatgaagat gaaatgtata aaattctctt gaatgattat gaatatcgtc agaaacaaat 961 cctaatggaa aatgcagaac ttaagaaggt tcttcaacaa atgaaaaagg aaatgatttc 1021 tcttctttct ccccaaaaga agaaacctag agaaagagta gatgatagta caggaactgt 1081 tatttccgat gttgaagaag atgccgggga actaagcaga gagagtatgt gggacctttc 1141 ctgtgaaact gtgagagagc agcttacaaa cagcatcaga aaacagtgga gaattttgaa 1201 aagtcatgta gaaaagcttg ataaccaagt ttcaaaggta cacctggaag gttttaatga 1261 tgaagatgta atctcacgac aagaccatga acaagaaact gaaaaactcg agttagaaat 1321 tcagcagtgt aaagaaatga ttaaaactca gcaacagctt ttacagcagc agctcgctac 1381 tgcatatgat gatgatacca cttcactatt acgagactgt tatttgttgg aagaaaagga 1441 acgtctcaaa gaagaatggt ccctttttaa agagcagaaa aagaattttg agagggagag 1501 acgaagcttt acagaagccg ctattcgcct gggattggag agaaaggcat ttgaagaaga 1561 aagagccagt tggttaaagc agcagtttct aaatatgact acctttgacc accagaactc 1621 agaaaatgtg aaacttttca gtgccttctc aggaagttct gattgggaca atcttatagt 1681 gcactcgagg cagccgcaaa agaagcctca cagtgtgtct aatgggtctc cagtttgcat 1741 gtctaaactt actaaatctc ttcctgcttc accttccact tcagactttt gccagacacg 1801 ttcctgcata tctgaacata gttcaatcaa tgtactgaat ataactgctg aagaaattaa 1861 accaaatcag gttggaggag aatgtacaaa tcaaaaatgg agtgtggcgt caagacctgg 1921 atcacaggaa ggttgctata gtggatgctc cttgagctac acaaattctc atgtagaaaa 1981 agatgactta ccttagacat gtggactgga atttttttca ttaatgtgtt catcaagttt 2041 cacatctaag ttgaaacagg gtgtgtcata aagtcagtta tctctaataa cttaagatgg 2101 tctgagttgt ttgtttggac ttccctgtct tcccccaaag agttgaaatc ttaaatctat 2161 ttaaaaggat ataaaagctt tggatatgta tttttagtaa cagaagcatc tggttctgtg 2221 aataaaggaa tgtatagatg tttggatgga aacaaaagca ctagactgag tttcctctta 2281 taggtattaa aaatagcact tttaggaaac tgattattgt aaatgtttaa ttttgtctca 2341 aatatagttg gcattggaag tttagccttt acttgaatgt atactgtaga tttttaacaa 2401 agcgagttct atatttatta tgtttagtgt ggtttgaaat tacctctttc atatgtttta 2461 aataaagtga aatttatgta tgttttgtac atagatacac atgattatgt taagaggctt 2521 taagatttaa aagtttcaca caaccataag tatagtattt catgccagta aaattttttt 2581 agtggtattc tgtttacaga tgtattagga ccattgatgc attacattta agaattctct 2641 ttaatacatc tgggcaataa atattgaaag gtattccatg aagctgagtt ctttagataa 2701 tcaacactac taacattaca tttttgagat ttttatgaca ttagattttt attttgtata 2761 tgtagaatat tataattttt aaaaggacta ttgatgatag aagaataggg gcaagacgac 2821 aaaagtacct ttgaataaaa caatttaaga aattggttta agatattgga tgatagaaga 2881 tatttaagat atctagatgg tgatattttc cttacaagat gggtaccagt atagtaatat 2941 ctgtatacta actagggctt tgtattgtca ataatttttt aataattttt taatgaggta 3001 tttaccactg aagaaatatg ataatataaa accatcaaat tttataattg agatgatact 3061 ctggaaaaac atgtcatttc attttcagaa aactcttaag ctctcttcag tctctgtaat 3121 gtttctgatt gcatgtttct tcatgaaaag tatgttgttg ttttgatagt aataataata 3181 aatgtaggct cagctctttc aaaaaaaaaa aaaaaaaaaa //