LOCUS BC033621 2762 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens pseudouridylate synthase 7 homolog (S.
cerevisiae)-like, mRNA (cDNA clone MGC:40389 IMAGE:5195232),
complete cds.
ACCESSION BC033621
VERSION BC033621.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2762)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2762)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC033621.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: h Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46358347.
FEATURES Location/Qualifiers
source 1..2762
/db_xref="H-InvDB:HIT000041869"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40389 IMAGE:5195232"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2762
/gene="PUS7L"
/gene_synonym="DKFZP434G1415"
/db_xref="GeneID:83448"
/db_xref="HGNC:HGNC:25276"
CDS 18..2123
/gene="PUS7L"
/gene_synonym="DKFZP434G1415"
/codon_start=1
/product="pseudouridylate synthase 7 homolog (S.
cerevisiae)-like"
/protein_id="AAH33621.1"
/db_xref="GeneID:83448"
/db_xref="HGNC:HGNC:25276"
/translation="MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQ
LVNKTIDEPIFKISEIQLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQ
SGSEKEDTIVDGTSKCEEKADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPE
FSIGRILDKNQRASLHSAIRQKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDF
FKYLDAKKENSKFTFKPDTNKDHRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVV
TVRFREKAHKRGKRPLSECQEGKVIYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSY
AGLKDKKAITYQAMVVRKVTPERLKNIEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHF
DIVIRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGPQRFGKGRKVHTDQIGLALL
KNEMMKAIKLFLTPEDLDDPVNRAKKYFLQTEDAKGTLSLMPEFKVRERALLEALHRF
GMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWNEAVSYRLETYGARVVQGDLVCLDEDI
DDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLGYNIQYPKNKVGQWYHDILSRDGLQ
TCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHDIDVKTKGSHIDETALSLLISFD
LDASCYATVCLKEIMKHDV"
BASE COUNT 971 a 434 c 541 g 816 t
ORIGIN
1 ggcactgtta tagaagaatg gaagaagata cagattatag aatcaggttt agttctttgt
61 gtttctttaa tgatcacgtt ggatttcatg gcactataaa aagctcacca agtgacttta
121 ttgttattga aattgatgaa cagggacagt tagttaataa gaccatcgat gagcctattt
181 tcaagattag tgaaatacaa cttgagccaa ataattttcc caaaaaacca aaactagatc
241 ttcaaaatct gtccttagaa gatggaagaa accaagaagt tcatactttg attaagtaca
301 ctgatggtga ccaaaatcat cagtctggtt cagaaaagga agatactatc gttgatggaa
361 cttccaaatg tgaagaaaaa gctgatgttt taagctcctt tttggatgaa aaaactcatg
421 agttactgaa taattttgcc tgtgatgtaa gagagaagtg gctttctaaa acagagctaa
481 ttggactacc tcctgaattc tcaataggca gaatccttga caaaaaccag agggctagtt
541 tacacagtgc cattaggcag aaatttccat ttttagtaac tgtaggaaaa aacagtgaaa
601 ttgttgtaaa accaaatctt gaatataaag aactttgtca tttggtatct gaagaggaag
661 catttgactt ttttaaatat ttggatgcaa agaaagaaaa ttccaaattt acctttaaac
721 ctgatacaaa caaagaccac agaaaagctg tccaccattt tgtcaacaaa aagtttggaa
781 accttgtgga aaccaaatct ttttctaaaa tgaattgcag tgctggtaat ccgaatgtgg
841 tggtaacagt aagatttcgg gaaaaagcac acaaacgtgg gaaaaggcct ctttctgaat
901 gccaagaagg aaaagttata tatacagctt ttaccctacg aaaggaaaac ctggaaatgt
961 ttgaagcgat tggtttttta gctatcaaac ttggtgttat tccttcggat tttagttatg
1021 caggccttaa agacaagaaa gccatcacct atcaagcaat ggttgttaga aaagtgactc
1081 cagagaggtt gaaaaatatt gaaaaagaaa ttgaaaagaa aagaatgaat gtctttaata
1141 ttcggtctgt agatgattcc ctgagacttg gtcagctcaa aggaaatcac tttgatattg
1201 tcattagaaa tttaaaaaaa caaataaatg attctgcaaa cctgagggag agaattatgg
1261 aagcaataga aaatgttaag aaaaaaggct ttgtgaatta ctatggacca cagagatttg
1321 ggaagggaag gaaagttcac acagaccaaa ttggactagc tttgctgaag aatgaaatga
1381 tgaaagccat aaaattgttt cttacaccag aagacttgga tgatcctgta aatagagcaa
1441 agaagtattt tcttcaaact gaggatgcta aaggcacact ttcattgatg cctgaattca
1501 aagtgcgtga gagagcattg ttggaggcat tgcaccgctt tggcatgacc gaggaaggtt
1561 gtatccaggc atggttctct ttaccccatt ccatgcgcat attctatgtt cacgcatata
1621 ccagcaaaat ttggaatgag gcagtatctt acagacttga aacctatgga gcaagagtag
1681 tgcagggtga tttggtctgt ttggatgaag acattgatga cgagaatttc ccaaatagta
1741 aaattcacct ggtaactgaa gaggagggat cagctaatat gtatgcaata catcaggtgg
1801 ttcttccagt acttggatac aatattcagt acccgaagaa caaagtaggg cagtggtacc
1861 atgacatact tagcagagat ggactacaga catgtaggtt taaagtacct actctgaaac
1921 tgaatatacc aggttgctat agacagattt tgaaacatcc ctgtaatctc tcataccaac
1981 taatggaaga tcatgacatt gatgtcaaaa cgaaaggttc ccacattgat gaaacagctt
2041 tgtctctttt gatctctttt gatcttgatg cttcatgcta tgctaccgtt tgtctgaagg
2101 aaataatgaa gcatgacgtt taaaactgat acccttggta taaccatata tatgtcactc
2161 tttgaaggaa agggggctaa aatgtcttaa gcaccttcca tgtgttagga acttcataat
2221 tgttatctct tttaattttc acagcatcct gagaagttag gatttgatac tgtaatttta
2281 tagaggatat gtaagtgtca gggtccaaat ttaaggtcca tgtgacccca aagcctgtgt
2341 tttttttcta ttatatgttt cagtgacctt tattctgtgt cataaagtta caatctttta
2401 aaaccattag gaatatatat aatactgcaa gataacattt aagaaaaaaa gttgtgaata
2461 ttcatatcct ccagctcctt gcttagaaca ctagtaaaat taggtcgcag tgaagcaaat
2521 gttggagaga aagatagatg aagcattttg ctaattatta ttgtccccct ttcctgtttt
2581 tgaaattatt gatcagaaca atatacaagg gaaatgccat acctctgttt gtgatagata
2641 ccccagagta gttattacct ctttgtgaga taagtaatct ttgatgaaga ttgaaataca
2701 atttctcatc caatttttat atcttggcat aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2761 aa
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