LOCUS BC033587 3556 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SV2 related protein homolog (rat), mRNA (cDNA clone
MGC:40088 IMAGE:5243017), complete cds.
ACCESSION BC033587
VERSION BC033587.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3556)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3556)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308166.
FEATURES Location/Qualifiers
source 1..3556
/db_xref="H-InvDB:HIT000041861"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40088 IMAGE:5243017"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3556
/gene="SVOP"
/gene_synonym="DKFZp761H039"
/db_xref="GeneID:55530"
/db_xref="HGNC:HGNC:25417"
CDS 173..1819
/gene="SVOP"
/gene_synonym="DKFZp761H039"
/codon_start=1
/product="SV2 related protein homolog (rat)"
/protein_id="AAH33587.1"
/db_xref="GeneID:55530"
/db_xref="HGNC:HGNC:25417"
/translation="MEEDLFQLRQLPVVKFRRTGESARSEDDTASGEHEVQIEGVHVG
LEAVELDDGAAVPKEFANPTDDTFMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMM
ILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWT
LYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWA
IGTVFEVVLAVFVMPSLGWRWLLILSAVPLLLFAVLCFWLPESARYDVLSGNQEKAIA
TLKRIATENGAPMPLGKLIISRQEDRGKMRDLFTPHFRWTTLLLWFIWFSNAFSYYGL
VLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLW
IIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPE
VYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLTLAVYSGCCLLAALASCFL
PIETKGRGLQESSHREWGQEMVGRGMHGAGVTRSNSGSQE"
BASE COUNT 820 a 902 c 1002 g 832 t
ORIGIN
1 ggctttgtct cgtgggctgg tccccagcgg ctccctcccc gaacagctgc tgctccaggg
61 aggaagcggc gcgggtgctg tccagcttcc cggtgctgaa aaccggaggg ctcgtcatcc
121 accactacca tgtaagggcc atgagaaggg ctcatcctgg cgcagcgcgg acatggagga
181 ggacttattc cagctaaggc agctgccggt tgtgaaattc cgtcgcacag gcgagagtgc
241 aaggtcagag gacgacacgg cttcaggaga gcatgaagtc cagattgaag gggtccacgt
301 gggcctagag gctgtggagc tggatgatgg ggcagctgtg cccaaggagt ttgccaatcc
361 cactgatgat actttcatgg tggaagatgc agtggaagcc attggctttg gaaaatttca
421 gtggaagctg tctgttctca ctggcttggc ttggatggct gatgccatgg agatgatgat
481 cctcagcatc ctggcaccac agctgcattg cgagtggagg ctcccaagct ggcaggtggc
541 attgctgacc tcggtggtct ttgtaggcat gatgtccagc tccacgctct ggggaaatat
601 ctcagaccag tacggcagga aaacagggct gaagatcagc gtgctgtgga ctctgtacta
661 tggcatcctt agtgcatttg cgcccgtgta tagctggatc ctggtgctcc ggggcctggt
721 gggcttcggg atcggaggag ttccccagtc ggtgacgctg tatgccgagt tccttcccat
781 gaaagccaga gctaaatgta ttttgctgat tgaggtattc tgggccatcg ggacagtgtt
841 cgaggtcgtc ctggctgtgt tcgtgatgcc cagcctgggc tggcgttggc tgctcatcct
901 ctcagctgtc ccgctcctcc tctttgccgt gctgtgtttc tggctgcctg aaagtgcaag
961 gtatgatgtg ctgtcaggga accaggaaaa ggcaatcgcc accttaaaga ggatagcaac
1021 tgaaaacgga gctcccatgc cgctggggaa actcatcatc tccagacagg aagaccgagg
1081 caaaatgagg gaccttttca caccccattt tagatggaca actttgctgc tgtggtttat
1141 atggttttcc aatgcattct cttactacgg gttagttcta ctcaccacag aactcttcca
1201 ggcaggagat gtctgcggca tctccagtcg gaagaaggct gtagaggcaa aatgcagcct
1261 ggcctgcgag tacctgagtg aggaggatta catggacttg ctgtggacca ccctctctga
1321 gtttccaggt gtccttgtga ctctgtggat tattgaccgc ctggggcgca agaagaccat
1381 ggccctgtgc tttgtcatct tctccttctg cagcctcctg ctgtttatct gtgttggaag
1441 aaatgtgctc actctgttac tcttcattgc aagagcgttt atttctggag gctttcaagc
1501 ggcatatgtt tacacacctg aggtctaccc cacggcaacg cgggccctcg gcctgggcac
1561 ctgcagcggc atggcaagag tgggtgctct catcactccg ttcatcgccc aggtgatgct
1621 ggaatcctct gtgtacctga ctctggcagt ttacagtggc tgctgcctcc tggctgccct
1681 ggcctcctgc tttttgccca ttgagaccaa aggccgagga ctgcaggagt ccagccaccg
1741 ggagtggggc caggagatgg tcggccgagg aatgcacggt gcaggtgtta ccaggtcgaa
1801 ctctggctct caggaatagt gaccgatggg ggactgagct ggtctttgag gctgcagagc
1861 ttggggggct ggcaggcccc aactggggca ctgattgtca ctgccgacat caagaactca
1921 cccaagagta tgacctggac caacagggtt ttgtgtcttg actcagtttg ctcatcttca
1981 ttgaggtcca cccagggatg gggagatgtt tgctctaggg ggttctctgt atatgtggtg
2041 aaagctttgt tcataacctg tggatctaca tgggaagact acccatatta ggagggtctg
2101 gtaatgccag caaccaatca gacaccaccc agagtcaccc ggccaaaccc tcagtgaaca
2161 accaaaatat ctctctgtag ataccgtcca ggctcaggcc catgtgacac ctgctgtcca
2221 cccaccggac ctgttcagta ggtttctccc acacccacag ccccaggctt tcttctttga
2281 aattgcaggc gatctaggtg tggtctgagc agctatttcc tggcaggggc cccccggttt
2341 gcctccctag agcctgacca gtggattctc tggcagatgg acatggtgca ttcaaactgg
2401 agccacatgc ccccacccag ccccctctgg agttgccgtt gttggcacca agagatccag
2461 atgtgtccct ggggacagct ggtcttgcac caggtgacaa cctcagaacg ccgttacccc
2521 ctgggaactg aggactgagg ccaaagtgaa tcaagctgaa gtcagagcac gggcctcccc
2581 ttctgaagca gcgaaggcca cggttccgac ttctttcctg gccccctcct tggtcaggct
2641 gaatggtgac ttttattgtt ttttgagacg gagtcttgat ctgtcgccca ggctggagtg
2701 cagtagcgtg atctcggctc actgcaactc tgcctcccgg gttcaagcaa ttctcctgtc
2761 tcagcctccc aagtagctgg gattacaggt gcccacctgt actttttagt agagacaggg
2821 tttcaccatg ttggccaggc tggtctcgaa ctcctgacct caagtgatcc acccgcctcg
2881 gcctcccaca gtgctgagat tacaggtggg agccactgca cccggcctga atgatgactc
2941 ttgaggggaa aaagtttact caggtttgca ggtacaaaat ccaaaatcca gggctttggg
3001 ttttgtgcat gggtagacag ctgaatgggc agagaaacca gaaggatgct acacccacca
3061 tctcatccca tggggatcag gggaccagga ttccctgatg cgaagctgct cctctgtcca
3121 gggacgtctt gatcattaca caaaggcagc ccctggagtt ccattcatgg agcctgccgt
3181 ggagtggaga ggggtgggag gactcaggtg tgtgaaatgt atatgttttc aaaggaagca
3241 gtgggaggcc agttggtttt gagttggtct ccgcaggcaa catcacttct gggatttggt
3301 ttactggagc cttttttccc atggtgaagg caggggacat agacaaggag ggaggaagct
3361 ggcagatccc atcaaaggcc agagcagaca gacctactgc ttgaagtaaa cattgcaagg
3421 aagccaattt gtgcgttcat ctcttattaa aacatgtcag tgatggacaa aaaaaaaaaa
3481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3541 aaaaaaaaaa aaaaaa
//