LOCUS BC033586 1804 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD5 molecule-like, mRNA (cDNA clone MGC:34443
IMAGE:5225975), complete cds.
ACCESSION BC033586
VERSION BC033586.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1804)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1804)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5174410.
FEATURES Location/Qualifiers
source 1..1804
/db_xref="H-InvDB:HIT000041860"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34443 IMAGE:5225975"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1804
/gene="CD5L"
/gene_synonym="PRO229"
/gene_synonym="SP-ALPHA"
/gene_synonym="Spalpha"
/db_xref="GeneID:922"
/db_xref="HGNC:HGNC:1690"
/db_xref="MIM:602592"
CDS 32..1075
/gene="CD5L"
/gene_synonym="PRO229"
/gene_synonym="SP-ALPHA"
/gene_synonym="Spalpha"
/codon_start=1
/product="CD5 molecule-like"
/protein_id="AAH33586.1"
/db_xref="GeneID:922"
/db_xref="HGNC:HGNC:1690"
/db_xref="MIM:602592"
/translation="MALLFSLILAICTRPGFLASPSGVRLVGGLHRCEGRVEVEQKGQ
WGTVCDDGWDIKDVAVLCRELGCGAASGTPSGILYEPPAEKEQKVLIQSVSCTGTEDT
LAQCEQEEVYDCSHDEDAGASCENPESSFSPVPEGVRLADGPGHCKGRVEVKHQNQWY
TVCQTGWSLRAAKVVCRQLGCGRAVLTQKRCNKHAYGRKPIWLSQMSCSGREATLQDC
PSGPWGKNTCNHDEDTWVECEDPFDLRLVGGDNLCSGRLEVLHKGVWGSVCDDNWGEK
EDQVVCKQLGCGKSLSPSFRDRKCYGPGVGRIWLDNVRCSGEEQSLEQCQHRFWGFHD
CTHQEDVAVICSG"
BASE COUNT 428 a 440 c 484 g 452 t
ORIGIN
1 tttcagctca tcaccttcac ctgccttggt catggctctg ctattctcct tgatccttgc
61 catttgcacc agacctggat tcctagcgtc tccatctgga gtgcggctgg tggggggcct
121 ccaccgctgt gaagggcggg tggaggtgga acagaaaggc cagtggggca ccgtgtgtga
181 tgacggctgg gacattaagg acgtggctgt gttgtgccgg gagctgggct gtggagctgc
241 cagcggaacc cctagtggta ttttgtatga gccaccagca gaaaaagagc aaaaggtcct
301 catccaatca gtcagttgca caggaacaga agatacattg gctcagtgtg agcaagaaga
361 agtttatgat tgttcacatg atgaagatgc tggggcatcg tgtgagaacc cagagagctc
421 tttctcccca gtcccagagg gtgtcaggct ggctgacggc cctgggcatt gcaagggacg
481 cgtggaagtg aagcaccaga accagtggta taccgtgtgc cagacaggct ggagcctccg
541 ggccgcaaag gtggtgtgcc ggcagctggg atgtgggagg gctgtactga ctcaaaaacg
601 ctgcaacaag catgcctatg gccgaaaacc catctggctg agccagatgt catgctcagg
661 acgagaagca acccttcagg attgcccttc tgggccttgg gggaagaaca cctgcaacca
721 tgatgaagac acgtgggtcg aatgtgaaga tccctttgac ttgagactag taggaggaga
781 caacctctgc tctgggcgac tggaggtgct gcacaagggc gtatggggct ctgtctgtga
841 tgacaactgg ggagaaaagg aggaccaggt ggtatgcaag caactgggct gtgggaagtc
901 cctctctccc tccttcagag accggaaatg ctatggccct ggggttggcc gcatctggct
961 ggataatgtt cgttgctcag gggaggagca gtccctggag cagtgccagc acagattttg
1021 ggggtttcac gactgcaccc accaggaaga tgtggctgtc atctgctcag gatagtatcc
1081 tggtgttgct tgacctggcc cccctggccc cgcctgccct ctgcttgttc tcctgagccc
1141 tgattatcct catactcatt ctggggctca ggcttgagcc actactccct catcccctca
1201 ggagtctgaa cactgggctt atgccttact ctcagggaca agcagccccc attgctgcct
1261 gtagatgtga gctgttgagt tccctcttgc tggggaagat gagcttccat gtatcctgtg
1321 ctcaaccctg accctttgac actggttctg gcctttcctg ccttttctca agctgcctgg
1381 aatcctcaaa cctgtcactt tggtcagatg tgcagaccat tactaaggtc tatgtctgca
1441 aacattacta atctaggtcc tattactaat ctatgtctgc aaacattaaa ggaatgaaac
1501 aatgaaagga acatttgaaa gaaaatgtgg gtagacaatt tcttgcaact tgggggaaag
1561 tttagaattc ttttgattgg actacttttt ttttttttcc tcaagcttca ggtgaccaca
1621 atagcaacac ctccctattc tgttatttct tagtgtaggt agacaattct ttcaggagca
1681 gagcagcgtc ctataatcct agaccttttc atgacgtgta aaaaatgatg tttcatcctc
1741 tgattgcccc aataaaaatc tttgttgtcc atccctatac aaaaaaaaaa aaaaaaaaaa
1801 aaaa
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