LOCUS BC033519 1970 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens syntaxin 11, mRNA (cDNA clone MGC:34537
IMAGE:5176646), complete cds.
ACCESSION BC033519
VERSION BC033519.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1970)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1970)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33667037.
FEATURES Location/Qualifiers
source 1..1970
/db_xref="H-InvDB:HIT000051133"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34537 IMAGE:5176646"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1970
/gene="STX11"
/gene_synonym="FHL4"
/gene_synonym="HLH4"
/gene_synonym="HPLH4"
/db_xref="GeneID:8676"
/db_xref="HGNC:HGNC:11429"
/db_xref="MIM:605014"
CDS 178..1041
/gene="STX11"
/gene_synonym="FHL4"
/gene_synonym="HLH4"
/gene_synonym="HPLH4"
/codon_start=1
/product="syntaxin 11"
/protein_id="AAH33519.1"
/db_xref="GeneID:8676"
/db_xref="HGNC:HGNC:11429"
/db_xref="MIM:605014"
/translation="MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESL
YRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHC
KLRAMKELSEAAEAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIR
IQRQLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLE
SRIRDVHELFLQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCR
TLCCFCCPCLK"
BASE COUNT 531 a 523 c 488 g 428 t
ORIGIN
1 ggcgcggagc tcgggcggcc gtggaggaac tcagcctcgg ccgcaggagg cgccgggagc
61 ggagccgccg ggagtcgcgc aacaggtttc cttctccatc gctgcgccca caggggacgc
121 gcgccctgcc gggagagggg cttctcggtt cgcactctcg ctcccagtcc aggcaaaatg
181 aaagaccggc tagcagaact tctggacttg tccaagcaat atgaccagca gttcccagac
241 ggggacgatg agtttgactc gccccacgag gacatcgtgt tcgagacgga ccacatcctg
301 gagtccctgt accgagacat ccgggacatt caggatgaaa accagctgct ggtggccgac
361 gtgaagcggc tgggaaagca gaacgcccgc ttcctcacgt ccatgcggcg cctcagcagc
421 atcaagcgcg acaccaactc catcgccaag gccatcaagg cccggggcga ggtcatccac
481 tgcaagctgc gcgccatgaa ggagctgagc gaggcggctg aggcccagca cggcccgcac
541 tcggcagtgg cgcgcatttc gcgggcgcag tacaacgcgc tcaccctcac cttccagcgc
601 gccatgcacg actacaacca ggccgagatg aagcagcgcg acaactgcaa gatccgcatc
661 cagcgccagc tggagatcat gggcaaggaa gtctcgggcg accagatcga ggacatgttc
721 gagcagggta agtgggacgt gttttccgag aacttgctgg ccgacgtgaa gggcgcgcgg
781 gccgccctca acgagatcga gagccgccac cgcgaactgc tgcgcctgga gagccgcatc
841 cgcgacgtac acgagctctt cttgcagatg gcggtgctgg tggagaagca ggccgacacc
901 ctgaacgtca tcgagctcaa cgtacaaaag acggtcgact acaccggcca ggccaaggcg
961 caggtgcgga aggccgtgca gtacgaggag aagaacccct gccggaccct ctgctgcttc
1021 tgctgtccct gcctcaagta gcaggccggc ccgggccgcc accgcccatc ccagaccatg
1081 gagcgcgctg ggaaggacgc accaaagccg ggagctctgc cctgcaggga gttgccccaa
1141 ccctttccgg aactcagtct ttagaaaaga aacgccaggt tcaagaattg caaaccagcc
1201 tgtgcttgga aagatggtta gttgataccg tccgatgatt cttcagtaaa gatagattcc
1261 cacaaagttg tgcaatgtca ttatatgaca ccttgcactc ttaccgtctt gacagaagcc
1321 aagtaaggaa ctgaagttgt atctgactgt agggtgaatg tctgaggcct gcctcctaat
1381 aaagactcaa ggaggaagtc aattgggcat ctgctaatag aatgaactca tgatggaaac
1441 ttcagttcat ttactttgtc ctgaaaattc cctggttctg ttccattttg agcgaaattg
1501 gccttgggaa aaaccacgtt cttcctttcc gattcttcat ccggtctacg ctatgcaatt
1561 cctccccaaa tatagatctt atttctgctc atttccccta cttattaaaa tcacaccaaa
1621 cacttactat tttcttatct ctttcacttt ttaaatatct ttcaccaggt tatattttgg
1681 tattattttt ccaaacattt ttaagcactg aatatcgaac aagcactcaa attgaagtat
1741 cagtcatgtt ttgtgtattt ttcgctgata aaaattattt aacatttata tttttacttg
1801 attacatatg cacatgtatg taaatgtaaa atactaatat tcactaatat atgtacataa
1861 tgatcaattg gtttaacttc ttttatgtaa gtatggtata taaatttcaa gacgaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//