LOCUS BC033515 1723 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens LysM, putative peptidoglycan-binding, domain
containing 2, mRNA (cDNA clone MGC:35274 IMAGE:5175226), complete
cds.
ACCESSION BC033515
VERSION BC033515.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1723)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1723)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: l Column: 21.
FEATURES Location/Qualifiers
source 1..1723
/db_xref="H-InvDB:HIT000051131"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35274 IMAGE:5175226"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1723
/gene="LYSMD2"
/gene_synonym="MGC35274"
/db_xref="GeneID:256586"
/db_xref="HGNC:HGNC:28571"
CDS 499..1146
/gene="LYSMD2"
/gene_synonym="MGC35274"
/codon_start=1
/product="LysM, putative peptidoglycan-binding, domain
containing 2"
/protein_id="AAH33515.1"
/db_xref="GeneID:256586"
/db_xref="HGNC:HGNC:28571"
/translation="MADSSPALSLREGGPRAPRPSAPSPPPRSRSGSESEEAELSLSL
ARTKTRSYGSTASVRAPLGAGVIERHVEHRVRAGDTLQGIALKYGVTMEQIKRANKLF
TNDCIFLKKTLNIPVISEKPLLFNGLNSIDSPENETADNSFSQEEEPVVAGEDLPPPS
PQESDVQPVQPEEVSARDFLQRLDLQIKLSTQAAKKLKEESRDEESPYATSLYHS"
BASE COUNT 432 a 442 c 445 g 404 t
ORIGIN
1 ggcagagctg gaaggtctgt gcaagctggc tcctgctggg gaatcaataa aggaggcaga
61 gcaacgcttt tttttttttt tcgccgtggc cagggcaggg ttctgccagg gctctatcgc
121 caatggagca ggggtccacc tggggcctag gacgcctgca gatagccctc tcttagcccc
181 aacggccgcg ggcttcagcg ctccccggct ccctcgctct gcagggtctt cccggtaccg
241 gcaggccgcg gcgggagctg ctttcgctct taaccttgca ggtgcgtgtg ccgcgggcgc
301 ccggggcagg caggacgcag aggaggaggc gcccgccatg cccggcctgc ggctccccgc
361 ctcggcttcc cgtccgccgc ccccgcggaa cggcctgctg cagcccctgt gaagaggaag
421 aggcggcggc ggcggcggag gaggaggagg cgccgccccc ttggcaagct ccccgacccg
481 gcggcctcgg caggacccat ggcggattcc tcgcccgcac tgtccctgcg ggaaggcggc
541 ccccgcgcgc cgcggccctc ggccccctcg ccgccgccgc gctcgcgctc cggctccgag
601 tccgaggagg ccgagctgtc gctgagcctg gcccgcacca agacccgctc gtacggcagc
661 accgccagcg tgcgggcgcc gctgggcgcc ggcgtcatcg agcgccatgt ggagcaccgg
721 gtccgcgcgg gcgacacgct gcagggcatc gcgctcaagt acggtgtcac gatggaacag
781 attaaaaggg ccaataaact gtttaccaat gattgtatat ttctgaagaa aactttgaac
841 atcccagtta tatcagagaa gcctttgttg tttaatggac ttaactccat tgattctcca
901 gaaaatgaaa ctgctgataa cagtttttct caggaagagg agccagtggt ggccggggaa
961 gacctccctc ctcccagtcc tcaagaatct gatgttcagc ctgtgcagcc tgaggaagtg
1021 tcagccagag atttcctgca gagacttgac ttgcagatta agttatcaac acaggcagcc
1081 aagaagctaa aagaagagag cagagatgaa gaaagtccct atgcaacttc cctctatcac
1141 agttaggtga tttgggggca taactctaac caaaattaag atatgtttgg accataaaga
1201 atccaacaac tgaagattca aaaacatccc ttctggattc ctatagtgtc catcttaaaa
1261 tcataactag gtagttctac ctgctgcagt tgcactgaag tgattagttc cctctggctt
1321 tctataattt taagtcttta ttatggcatg atggcaaggt tgtagcctaa agctcatcac
1381 ttttgtaggt ggtgttagtt tttagactag cttttataaa tactaattga cataaagcat
1441 caaagattat ttatatattt aggctaaaaa taatgtttat ctccttatgc aatcctgatt
1501 atgtgaaaat atggttgctg tttaagtgat gctgaatttg ctgtgtgttt ataacttaag
1561 tgctatatat atatttcgat atgtttacat attctctatt aatataaaga accaaatttt
1621 gtctgctatt ttgtaaaaat aaactacaaa agcctgaatg agaaaataaa ctatgttttc
1681 aaacttgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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