LOCUS BC033494 4620 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 3-phosphoinositide dependent protein kinase-1, mRNA
(cDNA clone MGC:35290 IMAGE:5176294), complete cds.
ACCESSION BC033494
VERSION BC033494.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4620)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4620)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: m Column: 13.
FEATURES Location/Qualifiers
source 1..4620
/db_xref="H-InvDB:HIT000051122"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35290 IMAGE:5176294"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4620
/gene="PDPK1"
/gene_synonym="MGC20087"
/gene_synonym="MGC35290"
/gene_synonym="PDK1"
/gene_synonym="PkB-like"
/gene_synonym="PkB-like 1"
/gene_synonym="PRO0461"
/db_xref="GeneID:5170"
/db_xref="HGNC:HGNC:8816"
/db_xref="MIM:605213"
CDS 63..1352
/gene="PDPK1"
/gene_synonym="MGC20087"
/gene_synonym="MGC35290"
/gene_synonym="PDK1"
/gene_synonym="PkB-like"
/gene_synonym="PkB-like 1"
/gene_synonym="PRO0461"
/codon_start=1
/product="3-phosphoinositide dependent protein kinase-1"
/protein_id="AAH33494.1"
/db_xref="GeneID:5170"
/db_xref="HGNC:HGNC:8816"
/db_xref="MIM:605213"
/translation="MARTTSQLYDAVPIQSSVVLCSCPSPSMVRTQTESSTPPGIPGG
SRQGPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLAREL
ATSREYATRANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE
YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV
TWENLHQQTPPKLTAYLPAMSEDDEDCYGNYDNLLSQFGCMQVSSSSSSHSLSASDTG
LPQRSGSNIEQYIHDLDSNSFELDLQFSEDEKRLLLEKQAGGNPWHQFVENNLILKMG
PVDKRKGLFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEAKNFKTFFVHTP
NRTYYLMDPSGNAHKWCRKIQEVWRQRYQSHPDAAVQ"
BASE COUNT 983 a 1310 c 1280 g 1047 t
ORIGIN
1 cgctgaggag gcgccgagcc gcgcagcgct gcgggggagg cgcccgcgcc gacgcggggc
61 ccatggccag gaccaccagc cagctgtatg acgccgtgcc catccagtcc agcgtggtgt
121 tatgttcctg cccatcccca tcaatggtga ggacccagac tgagtccagc acgccccctg
181 gcattcctgg tggcagcagg cagggccccg ccatggacgg cactgcagcc gagcctcggc
241 ccggcgccgg ctccctgcag catgcccagc ctccgccgca gcctcggaag aagcggcctg
301 aggacttcaa gtttgggaaa atccttgggg aaggctcttt ttccacggtt gtcctggctc
361 gagaactggc aacctccaga gaatatgcga ccagggccaa ctcattcgtg ggaacagcgc
421 agtacgtttc tccagagctg ctcacggaga agtccgcctg taagagttca gacctttggg
481 ctcttggatg cataatatac cagcttgtgg caggactccc accattccga gctggaaacg
541 agtatcttat atttcagaag atcattaagt tggaatatga ctttccagaa aaattcttcc
601 ctaaggcaag agacctcgtg gagaaacttt tggttttaga tgccacaaag cggttaggct
661 gtgaggaaat ggaaggatac ggacctctta aagcacaccc gttcttcgag tccgtcacgt
721 gggagaacct gcaccagcag acgcctccga agctcaccgc ttacctgccg gctatgtcgg
781 aagacgacga ggactgctat ggcaattatg acaatctcct gagccagttt ggctgcatgc
841 aggtgtcttc gtcctcctcc tcacactccc tgtcagcctc cgacacgggc ctgccccaga
901 ggtcaggcag caacatagag cagtacattc acgatctgga ctcgaactcc tttgaactgg
961 acttacagtt ttccgaagat gagaagaggt tgttgttgga gaagcaggct ggcggaaacc
1021 cttggcacca gtttgtagaa aataatttaa tactaaagat gggcccagtg gataagcgga
1081 agggtttatt tgcaagacga cgacagctgt tgctcacaga aggaccacat ttatattatg
1141 tggatcctgt caacaaagtt ctgaaaggtg aaattccttg gtcacaagaa cttcgaccag
1201 aggccaagaa ttttaaaact ttctttgtcc acacgcctaa caggacgtat tatctgatgg
1261 accccagcgg gaacgcacac aagtggtgca ggaagatcca ggaggtttgg aggcagcgat
1321 accagagcca cccggacgcc gctgtgcagt gacgtggcct gcggccgggc tgcccttcgc
1381 tgccaggaca cctgccccag cgcggcttgg ccgccatccg ggacgcttcc agaccacctg
1441 ccagccatca caaggggaac gcagaggcgg aaaccttgca gcatttttat ttaaaagaaa
1501 agaagaaaaa aaacacccaa ccacacaaag aacaaaacca gtaacaaaca caaaggaatt
1561 cagggtcgct ttgcttgctc tctgtgctcc gtggaggcct ccgtgtgccc tcgttgccgt
1621 ggggacccag ctccatgcac gtcaacccag tcccgcccag actagtggac agacctggtg
1681 tcaccagttt ttcctagcat cagtccgaac catgcgcccg ccctgcccca actgtgtgct
1741 ggtcctgctg tggccgaggg gaccgggtgt gtttggctct ttatgcccct cccgctgtgg
1801 tcctggaact cttcaccagg gagggagccc tgcgggggcc gcagctttgt ggagggagcc
1861 gccgtgcttc tgtcacctgc tccctttctt gcgtctccct gtgatgggcc cttaggcctg
1921 gctgggccca ttacatatcc ctgtggtggc tctggtggca gctttctgtg gcccctgctg
1981 tgttggcagg caggtttgcg tggtgaggag cgggaggggt tggagtggtg cgggagcagg
2041 ctgccgagtg gagggtgcca tcgagggctc cggatccctt atcctactta gcagtgttgg
2101 tctctggggc tggaagccga gcgcatgctg ggagcggtac tgtcagaagt gagcccagtt
2161 agtaccccgc tggctcactg cacgagagag tcctgccccg agccctaggt ggggccagga
2221 ggtgccttgg agaagccagc cagagcagag agggctgctg acttccgtgt ggagcagaga
2281 ggcctgaggg cctcctaaaa ggtttaaatg tccacgcctc tccagttgct gaagtagggt
2341 ctgagagaac cctggcatca gcagacccag ggtgcttctg tctcctgcag accacgccag
2401 ggagtgcaga caccaccgtc acacacgccc cttttgtgtt ttggttcaag tttctcagag
2461 cccctcagag cttctacatc tgtgcatcag aaatctcaca gccttctcat gctgccggct
2521 catctgggcc catagagtgg gctttgccag ttgctgttgc acaggaggcg agaacagcac
2581 acttcaaccc cagcttgctg gtcggctttc ctctagagag agccggtttt ggggccattt
2641 ccctttgatg ctttggtggc cttgccccgc tctgcagcac agacaggcca gatgcatttg
2701 tcctttgcct agctactccc caggtagaga gtgctcctgg tggcctggca ggtctgggcc
2761 cttctctccc tgcccaggtt gtccctggag ggcagccctc actccctttg ggggagaggc
2821 agacattgct gcccacagac ctgcctctga ctcaactgtg tccaccctcc ctggtcccta
2881 cccccaagtc acaggtgact cagcagtgac cctgtgtgcc aggccagatc caaactgaga
2941 gggaaggtgt cgtttttaca ctgctaatga cgagagtggc tctttttagc taggcgagta
3001 cagacggggc ctgggagggg gcagagatgt tccccaggcc ctgcctgtgg ttcctgcctg
3061 ggccttggct gctgctgtgt gagagctgca tgtgagcctg tgaccgtgag ctggggtgag
3121 ctgggccgca cctaccctgg ggccccaggg agcaggacgc tccggggccc agcacgttgc
3181 cctgggcctg tggccggagt cggagtcctc tctcctcctc ctggcttttg gaaaggcttg
3241 gctgtgttgg ggagtctctc ttagcccttt caggaatttc tgttcaggct tcctcctcct
3301 catcagctat tttacccatc tcagaacgtc ctgtgtctcc atgtaggaga gtggctctct
3361 cagatctctc agggcgtctg gttataggga aacaagtgga gcagggacgt ggctttaatt
3421 ggagcactcg gctgggctgc ttggggagac tcttccgtgc gttcttcctc tggatagaac
3481 caccacctcc tgggcgtcac tgacaagctc catcttaacc tccaaagcca cagaactagg
3541 ggctcagagc cagagctggc agccgccagc caaaatgatg ccattgcctg agctgacagc
3601 caagcccttc tgtgggtcac ctttctcctc acccagcccc ttgctcttcc cttttgaaag
3661 gcccgtgtgt tttctttcct taccctgtgc ttgctcatgt ctactccggt tttctctacc
3721 acatccttag agccatcacc tggcacgcag gcgccttaca ttctacggta gaacgtgggg
3781 tactgtgtgt gcacatagac acacttacgt ggaattacag ttgtgggttt atccaagatg
3841 aggaagattt cacctgctgt ttaatagact tggggccatg tgcctcccca cacatgggca
3901 aggacaggtg gaatgtcggg accacactgt gcggcttctc ggcacaaagc ggagggaggc
3961 tgtggtcgct gccggcctag gtgtcccagg tgccccgcct ttctctggga cacagttggg
4021 ggctggcttc tgagggattc ctttctcccc tctttgtgtg gccccagcca gggcggtggg
4081 cagtcctggt gtagagcaca agcctctcca ccctagagaa atgcctctgt accacggcta
4141 ccatgtggaa ccttaacttg cagaaggctt gttaacaatt gttttgagag agatggctgg
4201 tcatgccaca gctgctgggg actccgccta ctccagccct cttgggacac actgtgggat
4261 ttgtggccct tccccagagg aattgtggag actgtcccat ggaacaaacc ctcaggcacc
4321 agcacagggc tctgggtgac tcagtaaaac taacgtttgt ctctgacaag atcagctgta
4381 ggctcaccgg ctagagaaga ccactgtgag cattttgccg tatatcctgc cctgccattt
4441 gttcaccttt taaactaaaa taggaacatc cgacacacac cgtttgcatc gtcttctccc
4501 ttgatatttt aagcattttc ccatgtcatg agtttctcag aaacatgttt ttaacaattg
4561 taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//